Gene : Thecc1EG013400 T. cacao v1.1
Defline:  (1 of 1) PTHR12802//PTHR12802:SF60 - SWI/SNF COMPLEX-RELATED // PROTEIN REVEILLE 1-RELATED Genomic Order:  706
Name:  ? Thecc1EG013400 Secondary Identifier:  ? PAC:27449980
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG013400 0.5kb upstream 0.5kb upstream 4217 true scaffold_3: 12609459-12613675 Theobroma cacao
Thecc1EG013400 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 12613176-12613675 Theobroma cacao
Thecc1EG013400 0.5kb downstream 0.5kb downstream 4217 true scaffold_3: 12608959-12613175 Theobroma cacao
Thecc1EG013400 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 12608959-12609458 Theobroma cacao
Thecc1EG013400 1.0kb upstream 1.0kb upstream 4717 true scaffold_3: 12609459-12614175 Theobroma cacao
Thecc1EG013400 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 12613176-12614175 Theobroma cacao
Thecc1EG013400 1.0kb downstream 1.0kb downstream 4717 true scaffold_3: 12608459-12613175 Theobroma cacao
Thecc1EG013400 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 12608459-12609458 Theobroma cacao
Thecc1EG013400 2.0kb upstream 2.0kb upstream 5717 true scaffold_3: 12609459-12615175 Theobroma cacao
Thecc1EG013400 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 12613176-12615175 Theobroma cacao
Thecc1EG013400 2.0kb downstream 2.0kb downstream 5717 true scaffold_3: 12607459-12613175 Theobroma cacao
Thecc1EG013400 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 12607459-12609458 Theobroma cacao
Thecc1EG013400 5.0kb upstream 5.0kb upstream 8717 true scaffold_3: 12609459-12618175 Theobroma cacao
Thecc1EG013400 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 12613176-12618175 Theobroma cacao
Thecc1EG013400 5.0kb downstream 5.0kb downstream 8717 true scaffold_3: 12604459-12613175 Theobroma cacao
Thecc1EG013400 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 12604459-12609458 Theobroma cacao
Thecc1EG013400 10.0kb upstream 10.0kb upstream 13717 true scaffold_3: 12609459-12623175 Theobroma cacao
Thecc1EG013400 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 12613176-12623175 Theobroma cacao
Thecc1EG013400 10.0kb downstream 10.0kb downstream 13717 true scaffold_3: 12599459-12613175 Theobroma cacao
Thecc1EG013400 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 12599459-12609458 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826459 5264 Brassicales-Malvales View MSA
124347830 5266 SBM View MSA
124252836 5268 Malvidae View MSA
124069733 5270 Rosid View MSA
123742817 5271 Pentapetalae View MSA
122794763 5272 Eudicot View MSA
122048957 5273 Angiosperm View MSA
121311186 5274 Embryophyte View MSA
123427162 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain