Gene : Thecc1EG013017 T. cacao v1.1
Defline:  (1 of 2) PTHR10218:SF192 - EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 3 Genomic Order:  637
Name:  ? Thecc1EG013017 Secondary Identifier:  ? PAC:27447725
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG013017 0.5kb upstream 0.5kb upstream 12025 true scaffold_3: 8403336-8415360 Theobroma cacao
Thecc1EG013017 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 8414861-8415360 Theobroma cacao
Thecc1EG013017 0.5kb downstream 0.5kb downstream 12025 true scaffold_3: 8402836-8414860 Theobroma cacao
Thecc1EG013017 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 8402836-8403335 Theobroma cacao
Thecc1EG013017 1.0kb upstream 1.0kb upstream 12525 true scaffold_3: 8403336-8415860 Theobroma cacao
Thecc1EG013017 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 8414861-8415860 Theobroma cacao
Thecc1EG013017 1.0kb downstream 1.0kb downstream 12525 true scaffold_3: 8402336-8414860 Theobroma cacao
Thecc1EG013017 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 8402336-8403335 Theobroma cacao
Thecc1EG013017 2.0kb upstream 2.0kb upstream 13525 true scaffold_3: 8403336-8416860 Theobroma cacao
Thecc1EG013017 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 8414861-8416860 Theobroma cacao
Thecc1EG013017 2.0kb downstream 2.0kb downstream 13525 true scaffold_3: 8401336-8414860 Theobroma cacao
Thecc1EG013017 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 8401336-8403335 Theobroma cacao
Thecc1EG013017 5.0kb upstream 5.0kb upstream 16525 true scaffold_3: 8403336-8419860 Theobroma cacao
Thecc1EG013017 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 8414861-8419860 Theobroma cacao
Thecc1EG013017 5.0kb downstream 5.0kb downstream 16525 true scaffold_3: 8398336-8414860 Theobroma cacao
Thecc1EG013017 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 8398336-8403335 Theobroma cacao
Thecc1EG013017 10.0kb upstream 10.0kb upstream 21525 true scaffold_3: 8403336-8424860 Theobroma cacao
Thecc1EG013017 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 8414861-8424860 Theobroma cacao
Thecc1EG013017 10.0kb downstream 10.0kb downstream 21525 true scaffold_3: 8393336-8414860 Theobroma cacao
Thecc1EG013017 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 8393336-8403335 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826092 5264 Brassicales-Malvales View MSA
124320895 5266 SBM View MSA
124254653 5268 Malvidae View MSA
124071041 5270 Rosid View MSA
123753247 5271 Pentapetalae View MSA
122788427 5272 Eudicot View MSA
122051090 5273 Angiosperm View MSA
121350820 5274 Embryophyte View MSA
123381896 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain