Gene : Thecc1EG013015 T. cacao v1.1
Defline:  (1 of 2) PTHR22849//PTHR22849:SF9 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  635
Name:  ? Thecc1EG013015 Secondary Identifier:  ? PAC:27449578
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7511 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG013015 0.5kb upstream 0.5kb upstream 2592 true scaffold_3: 8396772-8399363 Theobroma cacao
Thecc1EG013015 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 8398864-8399363 Theobroma cacao
Thecc1EG013015 0.5kb downstream 0.5kb downstream 2592 true scaffold_3: 8396272-8398863 Theobroma cacao
Thecc1EG013015 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 8396272-8396771 Theobroma cacao
Thecc1EG013015 1.0kb upstream 1.0kb upstream 3092 true scaffold_3: 8396772-8399863 Theobroma cacao
Thecc1EG013015 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 8398864-8399863 Theobroma cacao
Thecc1EG013015 1.0kb downstream 1.0kb downstream 3092 true scaffold_3: 8395772-8398863 Theobroma cacao
Thecc1EG013015 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 8395772-8396771 Theobroma cacao
Thecc1EG013015 2.0kb upstream 2.0kb upstream 4092 true scaffold_3: 8396772-8400863 Theobroma cacao
Thecc1EG013015 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 8398864-8400863 Theobroma cacao
Thecc1EG013015 2.0kb downstream 2.0kb downstream 4092 true scaffold_3: 8394772-8398863 Theobroma cacao
Thecc1EG013015 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 8394772-8396771 Theobroma cacao
Thecc1EG013015 5.0kb upstream 5.0kb upstream 7092 true scaffold_3: 8396772-8403863 Theobroma cacao
Thecc1EG013015 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 8398864-8403863 Theobroma cacao
Thecc1EG013015 5.0kb downstream 5.0kb downstream 7092 true scaffold_3: 8391772-8398863 Theobroma cacao
Thecc1EG013015 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 8391772-8396771 Theobroma cacao
Thecc1EG013015 10.0kb upstream 10.0kb upstream 12092 true scaffold_3: 8396772-8408863 Theobroma cacao
Thecc1EG013015 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 8398864-8408863 Theobroma cacao
Thecc1EG013015 10.0kb downstream 10.0kb downstream 12092 true scaffold_3: 8386772-8398863 Theobroma cacao
Thecc1EG013015 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 8386772-8396771 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838287 5264 Brassicales-Malvales View MSA
124342273 5266 SBM View MSA
124246000 5268 Malvidae View MSA
124062447 5270 Rosid View MSA
123744256 5271 Pentapetalae View MSA
122789600 5272 Eudicot View MSA
122042359 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain