Gene : Thecc1EG014392 T. cacao v1.1

Defline:  (1 of 2) PTHR12565:SF153 - TRANSCRIPTION FACTOR BIM1 Genomic Order:  1128
Name:  ? Thecc1EG014392 Secondary Identifier:  ? PAC:27448638

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014392 0.5kb upstream 0.5kb upstream 8850 true scaffold_3: 22108970-22117819 Theobroma cacao
Thecc1EG014392 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 22117320-22117819 Theobroma cacao
Thecc1EG014392 0.5kb downstream 0.5kb downstream 8850 true scaffold_3: 22108470-22117319 Theobroma cacao
Thecc1EG014392 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 22108470-22108969 Theobroma cacao
Thecc1EG014392 1.0kb upstream 1.0kb upstream 9350 true scaffold_3: 22108970-22118319 Theobroma cacao
Thecc1EG014392 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 22117320-22118319 Theobroma cacao
Thecc1EG014392 1.0kb downstream 1.0kb downstream 9350 true scaffold_3: 22107970-22117319 Theobroma cacao
Thecc1EG014392 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 22107970-22108969 Theobroma cacao
Thecc1EG014392 2.0kb upstream 2.0kb upstream 10350 true scaffold_3: 22108970-22119319 Theobroma cacao
Thecc1EG014392 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 22117320-22119319 Theobroma cacao
Thecc1EG014392 2.0kb downstream 2.0kb downstream 10350 true scaffold_3: 22106970-22117319 Theobroma cacao
Thecc1EG014392 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 22106970-22108969 Theobroma cacao
Thecc1EG014392 5.0kb upstream 5.0kb upstream 13350 true scaffold_3: 22108970-22122319 Theobroma cacao
Thecc1EG014392 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 22117320-22122319 Theobroma cacao
Thecc1EG014392 5.0kb downstream 5.0kb downstream 13350 true scaffold_3: 22103970-22117319 Theobroma cacao
Thecc1EG014392 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 22103970-22108969 Theobroma cacao
Thecc1EG014392 10.0kb upstream 10.0kb upstream 18350 true scaffold_3: 22108970-22127319 Theobroma cacao
Thecc1EG014392 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 22117320-22127319 Theobroma cacao
Thecc1EG014392 10.0kb downstream 10.0kb downstream 18350 true scaffold_3: 22098970-22117319 Theobroma cacao
Thecc1EG014392 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 22098970-22108969 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833621 5264 Brassicales-Malvales View MSA
124321882 5266 SBM View MSA
124250491 5268 Malvidae View MSA
124066777 5270 Rosid View MSA
123738645 5271 Pentapetalae View MSA
122790983 5272 Eudicot View MSA
122046881 5273 Angiosperm View MSA
121348142 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain