Gene : Thecc1EG014345 T. cacao v1.1
Defline:  (1 of 1) PTHR11945//PTHR11945:SF166 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1099
Name:  ? Thecc1EG014345 Secondary Identifier:  ? PAC:27450589
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014345 0.5kb upstream 0.5kb upstream 18469 true scaffold_3: 21795715-21814183 Theobroma cacao
Thecc1EG014345 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 21795715-21796214 Theobroma cacao
Thecc1EG014345 0.5kb downstream 0.5kb downstream 18469 true scaffold_3: 21796215-21814683 Theobroma cacao
Thecc1EG014345 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 21814184-21814683 Theobroma cacao
Thecc1EG014345 1.0kb upstream 1.0kb upstream 18969 true scaffold_3: 21795215-21814183 Theobroma cacao
Thecc1EG014345 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 21795215-21796214 Theobroma cacao
Thecc1EG014345 1.0kb downstream 1.0kb downstream 18969 true scaffold_3: 21796215-21815183 Theobroma cacao
Thecc1EG014345 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 21814184-21815183 Theobroma cacao
Thecc1EG014345 2.0kb upstream 2.0kb upstream 19969 true scaffold_3: 21794215-21814183 Theobroma cacao
Thecc1EG014345 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 21794215-21796214 Theobroma cacao
Thecc1EG014345 2.0kb downstream 2.0kb downstream 19969 true scaffold_3: 21796215-21816183 Theobroma cacao
Thecc1EG014345 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 21814184-21816183 Theobroma cacao
Thecc1EG014345 5.0kb upstream 5.0kb upstream 22969 true scaffold_3: 21791215-21814183 Theobroma cacao
Thecc1EG014345 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 21791215-21796214 Theobroma cacao
Thecc1EG014345 5.0kb downstream 5.0kb downstream 22969 true scaffold_3: 21796215-21819183 Theobroma cacao
Thecc1EG014345 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 21814184-21819183 Theobroma cacao
Thecc1EG014345 10.0kb upstream 10.0kb upstream 27969 true scaffold_3: 21786215-21814183 Theobroma cacao
Thecc1EG014345 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 21786215-21796214 Theobroma cacao
Thecc1EG014345 10.0kb downstream 10.0kb downstream 27969 true scaffold_3: 21796215-21824183 Theobroma cacao
Thecc1EG014345 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 21814184-21824183 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041064 5273 Angiosperm View MSA
123834442 5264 Brassicales-Malvales View MSA
124348163 5266 SBM View MSA
124246685 5268 Malvidae View MSA
124072328 5270 Rosid View MSA
123751710 5271 Pentapetalae View MSA
122788972 5272 Eudicot View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain