Gene : Thecc1EG014279 T. cacao v1.1
Defline:  (1 of 2) PF06549 - Protein of unknown function (DUF1118) (DUF1118) Genomic Order:  1063
Name:  ? Thecc1EG014279 Secondary Identifier:  ? PAC:27450016
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014279 0.5kb upstream 0.5kb upstream 1962 true scaffold_3: 21298588-21300549 Theobroma cacao
Thecc1EG014279 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 21298588-21299087 Theobroma cacao
Thecc1EG014279 0.5kb downstream 0.5kb downstream 1962 true scaffold_3: 21299088-21301049 Theobroma cacao
Thecc1EG014279 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 21300550-21301049 Theobroma cacao
Thecc1EG014279 1.0kb upstream 1.0kb upstream 2462 true scaffold_3: 21298088-21300549 Theobroma cacao
Thecc1EG014279 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 21298088-21299087 Theobroma cacao
Thecc1EG014279 1.0kb downstream 1.0kb downstream 2462 true scaffold_3: 21299088-21301549 Theobroma cacao
Thecc1EG014279 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 21300550-21301549 Theobroma cacao
Thecc1EG014279 2.0kb upstream 2.0kb upstream 3462 true scaffold_3: 21297088-21300549 Theobroma cacao
Thecc1EG014279 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 21297088-21299087 Theobroma cacao
Thecc1EG014279 2.0kb downstream 2.0kb downstream 3462 true scaffold_3: 21299088-21302549 Theobroma cacao
Thecc1EG014279 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 21300550-21302549 Theobroma cacao
Thecc1EG014279 5.0kb upstream 5.0kb upstream 6462 true scaffold_3: 21294088-21300549 Theobroma cacao
Thecc1EG014279 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 21294088-21299087 Theobroma cacao
Thecc1EG014279 5.0kb downstream 5.0kb downstream 6462 true scaffold_3: 21299088-21305549 Theobroma cacao
Thecc1EG014279 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 21300550-21305549 Theobroma cacao
Thecc1EG014279 10.0kb upstream 10.0kb upstream 11462 true scaffold_3: 21289088-21300549 Theobroma cacao
Thecc1EG014279 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 21289088-21299087 Theobroma cacao
Thecc1EG014279 10.0kb downstream 10.0kb downstream 11462 true scaffold_3: 21299088-21310549 Theobroma cacao
Thecc1EG014279 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 21300550-21310549 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830654 5264 Brassicales-Malvales View MSA
124345400 5266 SBM View MSA
124237632 5268 Malvidae View MSA
124069799 5270 Rosid View MSA
123739706 5271 Pentapetalae View MSA
122790569 5272 Eudicot View MSA
122046942 5273 Angiosperm View MSA
121348217 5274 Embryophyte View MSA
123424979 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain