Gene : Thecc1EG014569 T. cacao v1.1

Defline:  (1 of 1) PTHR12606//PTHR12606:SF38 - SENTRIN/SUMO-SPECIFIC PROTEASE // SUBFAMILY NOT NAMED Genomic Order:  1262
Name:  ? Thecc1EG014569 Secondary Identifier:  ? PAC:27447831

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014569 0.5kb upstream 0.5kb upstream 2915 true scaffold_3: 23227696-23230610 Theobroma cacao
Thecc1EG014569 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 23230111-23230610 Theobroma cacao
Thecc1EG014569 0.5kb downstream 0.5kb downstream 2915 true scaffold_3: 23227196-23230110 Theobroma cacao
Thecc1EG014569 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 23227196-23227695 Theobroma cacao
Thecc1EG014569 1.0kb upstream 1.0kb upstream 3415 true scaffold_3: 23227696-23231110 Theobroma cacao
Thecc1EG014569 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 23230111-23231110 Theobroma cacao
Thecc1EG014569 1.0kb downstream 1.0kb downstream 3415 true scaffold_3: 23226696-23230110 Theobroma cacao
Thecc1EG014569 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 23226696-23227695 Theobroma cacao
Thecc1EG014569 2.0kb upstream 2.0kb upstream 4415 true scaffold_3: 23227696-23232110 Theobroma cacao
Thecc1EG014569 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 23230111-23232110 Theobroma cacao
Thecc1EG014569 2.0kb downstream 2.0kb downstream 4415 true scaffold_3: 23225696-23230110 Theobroma cacao
Thecc1EG014569 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 23225696-23227695 Theobroma cacao
Thecc1EG014569 5.0kb upstream 5.0kb upstream 7415 true scaffold_3: 23227696-23235110 Theobroma cacao
Thecc1EG014569 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 23230111-23235110 Theobroma cacao
Thecc1EG014569 5.0kb downstream 5.0kb downstream 7415 true scaffold_3: 23222696-23230110 Theobroma cacao
Thecc1EG014569 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 23222696-23227695 Theobroma cacao
Thecc1EG014569 10.0kb upstream 10.0kb upstream 12415 true scaffold_3: 23227696-23240110 Theobroma cacao
Thecc1EG014569 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 23230111-23240110 Theobroma cacao
Thecc1EG014569 10.0kb downstream 10.0kb downstream 12415 true scaffold_3: 23217696-23230110 Theobroma cacao
Thecc1EG014569 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 23217696-23227695 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837012 5264 Brassicales-Malvales View MSA
124346975 5266 SBM View MSA
124247826 5268 Malvidae View MSA
124074830 5270 Rosid View MSA
123753730 5271 Pentapetalae View MSA
122794426 5272 Eudicot View MSA
122049176 5273 Angiosperm View MSA
123429184 5275 Viridiplantae View MSA
121311282 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain