Gene : Thecc1EG014680 T. cacao v1.1
Defline:  (1 of 1) PTHR12300//PTHR12300:SF56 - HVA22-LIKE PROTEINS // SUBFAMILY NOT NAMED Genomic Order:  1355
Name:  ? Thecc1EG014680 Secondary Identifier:  ? PAC:27446969
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014680 0.5kb upstream 0.5kb upstream 1785 true scaffold_3: 23826369-23828153 Theobroma cacao
Thecc1EG014680 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 23826369-23826868 Theobroma cacao
Thecc1EG014680 0.5kb downstream 0.5kb downstream 1785 true scaffold_3: 23826869-23828653 Theobroma cacao
Thecc1EG014680 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 23828154-23828653 Theobroma cacao
Thecc1EG014680 1.0kb upstream 1.0kb upstream 2285 true scaffold_3: 23825869-23828153 Theobroma cacao
Thecc1EG014680 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 23825869-23826868 Theobroma cacao
Thecc1EG014680 1.0kb downstream 1.0kb downstream 2285 true scaffold_3: 23826869-23829153 Theobroma cacao
Thecc1EG014680 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 23828154-23829153 Theobroma cacao
Thecc1EG014680 2.0kb upstream 2.0kb upstream 3285 true scaffold_3: 23824869-23828153 Theobroma cacao
Thecc1EG014680 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 23824869-23826868 Theobroma cacao
Thecc1EG014680 2.0kb downstream 2.0kb downstream 3285 true scaffold_3: 23826869-23830153 Theobroma cacao
Thecc1EG014680 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 23828154-23830153 Theobroma cacao
Thecc1EG014680 5.0kb upstream 5.0kb upstream 6285 true scaffold_3: 23821869-23828153 Theobroma cacao
Thecc1EG014680 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 23821869-23826868 Theobroma cacao
Thecc1EG014680 5.0kb downstream 5.0kb downstream 6285 true scaffold_3: 23826869-23833153 Theobroma cacao
Thecc1EG014680 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 23828154-23833153 Theobroma cacao
Thecc1EG014680 10.0kb upstream 10.0kb upstream 11285 true scaffold_3: 23816869-23828153 Theobroma cacao
Thecc1EG014680 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 23816869-23826868 Theobroma cacao
Thecc1EG014680 10.0kb downstream 10.0kb downstream 11285 true scaffold_3: 23826869-23838153 Theobroma cacao
Thecc1EG014680 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 23828154-23838153 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830573 5264 Brassicales-Malvales View MSA
124341448 5266 SBM View MSA
124248122 5268 Malvidae View MSA
124062938 5270 Rosid View MSA
123747497 5271 Pentapetalae View MSA
122794612 5272 Eudicot View MSA
122049450 5273 Angiosperm View MSA
121349779 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain