Gene : Thecc1EG014965 T. cacao v1.1
Defline:  (1 of 6) 3.4.23.50 - Human endogenous retrovirus K endopeptidase / Human retrovirus K10 retropepsin Genomic Order:  1611
Name:  ? Thecc1EG014965 Secondary Identifier:  ? PAC:27449960
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG014965 0.5kb upstream 0.5kb upstream 4199 true scaffold_3: 25399496-25403694 Theobroma cacao
Thecc1EG014965 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 25399496-25399995 Theobroma cacao
Thecc1EG014965 0.5kb downstream 0.5kb downstream 4199 true scaffold_3: 25399996-25404194 Theobroma cacao
Thecc1EG014965 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 25403695-25404194 Theobroma cacao
Thecc1EG014965 1.0kb upstream 1.0kb upstream 4699 true scaffold_3: 25398996-25403694 Theobroma cacao
Thecc1EG014965 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 25398996-25399995 Theobroma cacao
Thecc1EG014965 1.0kb downstream 1.0kb downstream 4699 true scaffold_3: 25399996-25404694 Theobroma cacao
Thecc1EG014965 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 25403695-25404694 Theobroma cacao
Thecc1EG014965 2.0kb upstream 2.0kb upstream 5699 true scaffold_3: 25397996-25403694 Theobroma cacao
Thecc1EG014965 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 25397996-25399995 Theobroma cacao
Thecc1EG014965 2.0kb downstream 2.0kb downstream 5699 true scaffold_3: 25399996-25405694 Theobroma cacao
Thecc1EG014965 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 25403695-25405694 Theobroma cacao
Thecc1EG014965 5.0kb upstream 5.0kb upstream 8699 true scaffold_3: 25394996-25403694 Theobroma cacao
Thecc1EG014965 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 25394996-25399995 Theobroma cacao
Thecc1EG014965 5.0kb downstream 5.0kb downstream 8699 true scaffold_3: 25399996-25408694 Theobroma cacao
Thecc1EG014965 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 25403695-25408694 Theobroma cacao
Thecc1EG014965 10.0kb upstream 10.0kb upstream 13699 true scaffold_3: 25389996-25403694 Theobroma cacao
Thecc1EG014965 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 25389996-25399995 Theobroma cacao
Thecc1EG014965 10.0kb downstream 10.0kb downstream 13699 true scaffold_3: 25399996-25413694 Theobroma cacao
Thecc1EG014965 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 25403695-25413694 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028911 5273 Angiosperm View MSA
123823778 5264 Brassicales-Malvales View MSA
124319834 5266 SBM View MSA
124168343 5268 Malvidae View MSA
124074170 5270 Rosid View MSA
123753436 5271 Pentapetalae View MSA
122775104 5272 Eudicot View MSA
121298339 5274 Embryophyte View MSA
123336316 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain