Gene : Thecc1EG015219 T. cacao v1.1
Defline:  Hydroxyproline-rich glycoprotein family protein (61%P) Genomic Order:  1825
Name:  ? Thecc1EG015219 Secondary Identifier:  ? PAC:27450217
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015219 0.5kb upstream 0.5kb upstream 4514 true scaffold_3: 26838559-26843072 Theobroma cacao
Thecc1EG015219 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 26842573-26843072 Theobroma cacao
Thecc1EG015219 0.5kb downstream 0.5kb downstream 4514 true scaffold_3: 26838059-26842572 Theobroma cacao
Thecc1EG015219 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 26838059-26838558 Theobroma cacao
Thecc1EG015219 1.0kb upstream 1.0kb upstream 5014 true scaffold_3: 26838559-26843572 Theobroma cacao
Thecc1EG015219 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 26842573-26843572 Theobroma cacao
Thecc1EG015219 1.0kb downstream 1.0kb downstream 5014 true scaffold_3: 26837559-26842572 Theobroma cacao
Thecc1EG015219 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 26837559-26838558 Theobroma cacao
Thecc1EG015219 2.0kb upstream 2.0kb upstream 6014 true scaffold_3: 26838559-26844572 Theobroma cacao
Thecc1EG015219 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 26842573-26844572 Theobroma cacao
Thecc1EG015219 2.0kb downstream 2.0kb downstream 6014 true scaffold_3: 26836559-26842572 Theobroma cacao
Thecc1EG015219 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 26836559-26838558 Theobroma cacao
Thecc1EG015219 5.0kb upstream 5.0kb upstream 9014 true scaffold_3: 26838559-26847572 Theobroma cacao
Thecc1EG015219 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 26842573-26847572 Theobroma cacao
Thecc1EG015219 5.0kb downstream 5.0kb downstream 9014 true scaffold_3: 26833559-26842572 Theobroma cacao
Thecc1EG015219 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 26833559-26838558 Theobroma cacao
Thecc1EG015219 10.0kb upstream 10.0kb upstream 14014 true scaffold_3: 26838559-26852572 Theobroma cacao
Thecc1EG015219 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 26842573-26852572 Theobroma cacao
Thecc1EG015219 10.0kb downstream 10.0kb downstream 14014 true scaffold_3: 26828559-26842572 Theobroma cacao
Thecc1EG015219 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 26828559-26838558 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834185 5264 Brassicales-Malvales View MSA
124346110 5266 SBM View MSA
124244713 5268 Malvidae View MSA
124071486 5270 Rosid View MSA
123741835 5271 Pentapetalae View MSA
122789681 5272 Eudicot View MSA
122042533 5273 Angiosperm View MSA
121350164 5274 Embryophyte View MSA
123381599 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain