Gene : Thecc1EG015163 T. cacao v1.1
Defline:  (1 of 1) KOG0978//KOG4787 - E3 ubiquitin ligase involved in syntaxin degradation // Uncharacterized conserved protein Genomic Order:  1778
Name:  ? Thecc1EG015163 Secondary Identifier:  ? PAC:27447427
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015163 0.5kb upstream 0.5kb upstream 6405 true scaffold_3: 26534813-26541217 Theobroma cacao
Thecc1EG015163 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 26534813-26535312 Theobroma cacao
Thecc1EG015163 0.5kb downstream 0.5kb downstream 6405 true scaffold_3: 26535313-26541717 Theobroma cacao
Thecc1EG015163 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 26541218-26541717 Theobroma cacao
Thecc1EG015163 1.0kb upstream 1.0kb upstream 6905 true scaffold_3: 26534313-26541217 Theobroma cacao
Thecc1EG015163 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 26534313-26535312 Theobroma cacao
Thecc1EG015163 1.0kb downstream 1.0kb downstream 6905 true scaffold_3: 26535313-26542217 Theobroma cacao
Thecc1EG015163 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 26541218-26542217 Theobroma cacao
Thecc1EG015163 2.0kb upstream 2.0kb upstream 7905 true scaffold_3: 26533313-26541217 Theobroma cacao
Thecc1EG015163 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 26533313-26535312 Theobroma cacao
Thecc1EG015163 2.0kb downstream 2.0kb downstream 7905 true scaffold_3: 26535313-26543217 Theobroma cacao
Thecc1EG015163 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 26541218-26543217 Theobroma cacao
Thecc1EG015163 5.0kb upstream 5.0kb upstream 10905 true scaffold_3: 26530313-26541217 Theobroma cacao
Thecc1EG015163 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 26530313-26535312 Theobroma cacao
Thecc1EG015163 5.0kb downstream 5.0kb downstream 10905 true scaffold_3: 26535313-26546217 Theobroma cacao
Thecc1EG015163 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 26541218-26546217 Theobroma cacao
Thecc1EG015163 10.0kb upstream 10.0kb upstream 15905 true scaffold_3: 26525313-26541217 Theobroma cacao
Thecc1EG015163 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 26525313-26535312 Theobroma cacao
Thecc1EG015163 10.0kb downstream 10.0kb downstream 15905 true scaffold_3: 26535313-26551217 Theobroma cacao
Thecc1EG015163 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 26541218-26551217 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040955 5273 Angiosperm View MSA
123837985 5264 Brassicales-Malvales View MSA
124346689 5266 SBM View MSA
124241587 5268 Malvidae View MSA
124073643 5270 Rosid View MSA
123747619 5271 Pentapetalae View MSA
122785648 5272 Eudicot View MSA
121348283 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain