Gene : Thecc1EG015354 T. cacao v1.1
Defline:  (1 of 3) K14948 - polypyrimidine tract-binding protein 2 (PTBP2, NPTB) Genomic Order:  1943
Name:  ? Thecc1EG015354 Secondary Identifier:  ? PAC:27447381
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015354 0.5kb upstream 0.5kb upstream 6516 true scaffold_3: 27501984-27508499 Theobroma cacao
Thecc1EG015354 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 27501984-27502483 Theobroma cacao
Thecc1EG015354 0.5kb downstream 0.5kb downstream 6516 true scaffold_3: 27502484-27508999 Theobroma cacao
Thecc1EG015354 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 27508500-27508999 Theobroma cacao
Thecc1EG015354 1.0kb upstream 1.0kb upstream 7016 true scaffold_3: 27501484-27508499 Theobroma cacao
Thecc1EG015354 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 27501484-27502483 Theobroma cacao
Thecc1EG015354 1.0kb downstream 1.0kb downstream 7016 true scaffold_3: 27502484-27509499 Theobroma cacao
Thecc1EG015354 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 27508500-27509499 Theobroma cacao
Thecc1EG015354 2.0kb upstream 2.0kb upstream 8016 true scaffold_3: 27500484-27508499 Theobroma cacao
Thecc1EG015354 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 27500484-27502483 Theobroma cacao
Thecc1EG015354 2.0kb downstream 2.0kb downstream 8016 true scaffold_3: 27502484-27510499 Theobroma cacao
Thecc1EG015354 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 27508500-27510499 Theobroma cacao
Thecc1EG015354 5.0kb upstream 5.0kb upstream 11016 true scaffold_3: 27497484-27508499 Theobroma cacao
Thecc1EG015354 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 27497484-27502483 Theobroma cacao
Thecc1EG015354 5.0kb downstream 5.0kb downstream 11016 true scaffold_3: 27502484-27513499 Theobroma cacao
Thecc1EG015354 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 27508500-27513499 Theobroma cacao
Thecc1EG015354 10.0kb upstream 10.0kb upstream 16016 true scaffold_3: 27492484-27508499 Theobroma cacao
Thecc1EG015354 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 27492484-27502483 Theobroma cacao
Thecc1EG015354 10.0kb downstream 10.0kb downstream 16016 true scaffold_3: 27502484-27518499 Theobroma cacao
Thecc1EG015354 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 27508500-27518499 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829998 5264 Brassicales-Malvales View MSA
124321645 5266 SBM View MSA
124244439 5268 Malvidae View MSA
124060480 5270 Rosid View MSA
123737702 5271 Pentapetalae View MSA
122796328 5272 Eudicot View MSA
122049388 5273 Angiosperm View MSA
121345095 5274 Embryophyte View MSA
123424707 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain