Gene : Thecc1EG015336 T. cacao v1.1
Defline:  (1 of 3) PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Genomic Order:  1926
Name:  ? Thecc1EG015336 Secondary Identifier:  ? PAC:27447251
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015336 0.5kb upstream 0.5kb upstream 4044 true scaffold_3: 27422148-27426191 Theobroma cacao
Thecc1EG015336 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 27422148-27422647 Theobroma cacao
Thecc1EG015336 0.5kb downstream 0.5kb downstream 4044 true scaffold_3: 27422648-27426691 Theobroma cacao
Thecc1EG015336 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 27426192-27426691 Theobroma cacao
Thecc1EG015336 1.0kb upstream 1.0kb upstream 4544 true scaffold_3: 27421648-27426191 Theobroma cacao
Thecc1EG015336 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 27421648-27422647 Theobroma cacao
Thecc1EG015336 1.0kb downstream 1.0kb downstream 4544 true scaffold_3: 27422648-27427191 Theobroma cacao
Thecc1EG015336 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 27426192-27427191 Theobroma cacao
Thecc1EG015336 2.0kb upstream 2.0kb upstream 5544 true scaffold_3: 27420648-27426191 Theobroma cacao
Thecc1EG015336 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 27420648-27422647 Theobroma cacao
Thecc1EG015336 2.0kb downstream 2.0kb downstream 5544 true scaffold_3: 27422648-27428191 Theobroma cacao
Thecc1EG015336 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 27426192-27428191 Theobroma cacao
Thecc1EG015336 5.0kb upstream 5.0kb upstream 8544 true scaffold_3: 27417648-27426191 Theobroma cacao
Thecc1EG015336 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 27417648-27422647 Theobroma cacao
Thecc1EG015336 5.0kb downstream 5.0kb downstream 8544 true scaffold_3: 27422648-27431191 Theobroma cacao
Thecc1EG015336 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 27426192-27431191 Theobroma cacao
Thecc1EG015336 10.0kb upstream 10.0kb upstream 13544 true scaffold_3: 27412648-27426191 Theobroma cacao
Thecc1EG015336 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 27412648-27422647 Theobroma cacao
Thecc1EG015336 10.0kb downstream 10.0kb downstream 13544 true scaffold_3: 27422648-27436191 Theobroma cacao
Thecc1EG015336 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 27426192-27436191 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838612 5264 Brassicales-Malvales View MSA
124339281 5266 SBM View MSA
124251372 5268 Malvidae View MSA
124071112 5270 Rosid View MSA
123744943 5271 Pentapetalae View MSA
122797737 5272 Eudicot View MSA
122048577 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain