Gene : Thecc1EG015319 T. cacao v1.1

Defline:  (1 of 2) PTHR24223//PTHR24223:SF192 - FAMILY NOT NAMED // ABC TRANSPORTER C FAMILY MEMBER 10 Genomic Order:  1914
Name:  ? Thecc1EG015319 Secondary Identifier:  ? PAC:27447963

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015319 0.5kb upstream 0.5kb upstream 31239 true scaffold_3: 27337369-27368607 Theobroma cacao
Thecc1EG015319 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 27368108-27368607 Theobroma cacao
Thecc1EG015319 0.5kb downstream 0.5kb downstream 31239 true scaffold_3: 27336869-27368107 Theobroma cacao
Thecc1EG015319 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 27336869-27337368 Theobroma cacao
Thecc1EG015319 1.0kb upstream 1.0kb upstream 31739 true scaffold_3: 27337369-27369107 Theobroma cacao
Thecc1EG015319 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 27368108-27369107 Theobroma cacao
Thecc1EG015319 1.0kb downstream 1.0kb downstream 31739 true scaffold_3: 27336369-27368107 Theobroma cacao
Thecc1EG015319 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 27336369-27337368 Theobroma cacao
Thecc1EG015319 2.0kb upstream 2.0kb upstream 32739 true scaffold_3: 27337369-27370107 Theobroma cacao
Thecc1EG015319 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 27368108-27370107 Theobroma cacao
Thecc1EG015319 2.0kb downstream 2.0kb downstream 32739 true scaffold_3: 27335369-27368107 Theobroma cacao
Thecc1EG015319 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 27335369-27337368 Theobroma cacao
Thecc1EG015319 5.0kb upstream 5.0kb upstream 35739 true scaffold_3: 27337369-27373107 Theobroma cacao
Thecc1EG015319 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 27368108-27373107 Theobroma cacao
Thecc1EG015319 5.0kb downstream 5.0kb downstream 35739 true scaffold_3: 27332369-27368107 Theobroma cacao
Thecc1EG015319 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 27332369-27337368 Theobroma cacao
Thecc1EG015319 10.0kb upstream 10.0kb upstream 40739 true scaffold_3: 27337369-27378107 Theobroma cacao
Thecc1EG015319 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 27368108-27378107 Theobroma cacao
Thecc1EG015319 10.0kb downstream 10.0kb downstream 40739 true scaffold_3: 27327369-27368107 Theobroma cacao
Thecc1EG015319 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 27327369-27337368 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829801 5264 Brassicales-Malvales View MSA
124338032 5266 SBM View MSA
124242185 5268 Malvidae View MSA
124062528 5270 Rosid View MSA
123749567 5271 Pentapetalae View MSA
122793261 5272 Eudicot View MSA
122043507 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121346879 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain