Gene : Thecc1EG015299 T. cacao v1.1
Defline:  (1 of 1) PTHR27000:SF52 - LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN-RELATED Genomic Order:  1897
Name:  ? Thecc1EG015299 Secondary Identifier:  ? PAC:27449983
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015299 0.5kb upstream 0.5kb upstream 3217 true scaffold_3: 27241314-27244530 Theobroma cacao
Thecc1EG015299 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 27241314-27241813 Theobroma cacao
Thecc1EG015299 0.5kb downstream 0.5kb downstream 3217 true scaffold_3: 27241814-27245030 Theobroma cacao
Thecc1EG015299 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 27244531-27245030 Theobroma cacao
Thecc1EG015299 1.0kb upstream 1.0kb upstream 3717 true scaffold_3: 27240814-27244530 Theobroma cacao
Thecc1EG015299 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 27240814-27241813 Theobroma cacao
Thecc1EG015299 1.0kb downstream 1.0kb downstream 3717 true scaffold_3: 27241814-27245530 Theobroma cacao
Thecc1EG015299 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 27244531-27245530 Theobroma cacao
Thecc1EG015299 2.0kb upstream 2.0kb upstream 4717 true scaffold_3: 27239814-27244530 Theobroma cacao
Thecc1EG015299 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 27239814-27241813 Theobroma cacao
Thecc1EG015299 2.0kb downstream 2.0kb downstream 4717 true scaffold_3: 27241814-27246530 Theobroma cacao
Thecc1EG015299 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 27244531-27246530 Theobroma cacao
Thecc1EG015299 5.0kb upstream 5.0kb upstream 7717 true scaffold_3: 27236814-27244530 Theobroma cacao
Thecc1EG015299 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 27236814-27241813 Theobroma cacao
Thecc1EG015299 5.0kb downstream 5.0kb downstream 7717 true scaffold_3: 27241814-27249530 Theobroma cacao
Thecc1EG015299 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 27244531-27249530 Theobroma cacao
Thecc1EG015299 10.0kb upstream 10.0kb upstream 12717 true scaffold_3: 27231814-27244530 Theobroma cacao
Thecc1EG015299 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 27231814-27241813 Theobroma cacao
Thecc1EG015299 10.0kb downstream 10.0kb downstream 12717 true scaffold_3: 27241814-27254530 Theobroma cacao
Thecc1EG015299 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 27244531-27254530 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831536 5264 Brassicales-Malvales View MSA
124336530 5266 SBM View MSA
124237636 5268 Malvidae View MSA
124071295 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain