Gene : Thecc1EG015415 T. cacao v1.1
Defline:  (1 of 1) PTHR11262//PTHR11262:SF11 - HSL AND CLP PROTEASE // ATP-DEPENDENT CLP PROTEASE REGULATORY SUBUNIT CLPX Genomic Order:  1994
Name:  ? Thecc1EG015415 Secondary Identifier:  ? PAC:27448216
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015415 0.5kb upstream 0.5kb upstream 7696 true scaffold_3: 27837859-27845554 Theobroma cacao
Thecc1EG015415 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 27845055-27845554 Theobroma cacao
Thecc1EG015415 0.5kb downstream 0.5kb downstream 7696 true scaffold_3: 27837359-27845054 Theobroma cacao
Thecc1EG015415 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 27837359-27837858 Theobroma cacao
Thecc1EG015415 1.0kb upstream 1.0kb upstream 8196 true scaffold_3: 27837859-27846054 Theobroma cacao
Thecc1EG015415 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 27845055-27846054 Theobroma cacao
Thecc1EG015415 1.0kb downstream 1.0kb downstream 8196 true scaffold_3: 27836859-27845054 Theobroma cacao
Thecc1EG015415 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 27836859-27837858 Theobroma cacao
Thecc1EG015415 2.0kb upstream 2.0kb upstream 9196 true scaffold_3: 27837859-27847054 Theobroma cacao
Thecc1EG015415 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 27845055-27847054 Theobroma cacao
Thecc1EG015415 2.0kb downstream 2.0kb downstream 9196 true scaffold_3: 27835859-27845054 Theobroma cacao
Thecc1EG015415 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 27835859-27837858 Theobroma cacao
Thecc1EG015415 5.0kb upstream 5.0kb upstream 12196 true scaffold_3: 27837859-27850054 Theobroma cacao
Thecc1EG015415 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 27845055-27850054 Theobroma cacao
Thecc1EG015415 5.0kb downstream 5.0kb downstream 12196 true scaffold_3: 27832859-27845054 Theobroma cacao
Thecc1EG015415 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 27832859-27837858 Theobroma cacao
Thecc1EG015415 10.0kb upstream 10.0kb upstream 17196 true scaffold_3: 27837859-27855054 Theobroma cacao
Thecc1EG015415 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 27845055-27855054 Theobroma cacao
Thecc1EG015415 10.0kb downstream 10.0kb downstream 17196 true scaffold_3: 27827859-27845054 Theobroma cacao
Thecc1EG015415 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 27827859-27837858 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828988 5264 Brassicales-Malvales View MSA
124342428 5266 SBM View MSA
124236866 5268 Malvidae View MSA
124065243 5270 Rosid View MSA
123749769 5271 Pentapetalae View MSA
122790976 5272 Eudicot View MSA
122041595 5273 Angiosperm View MSA
121347739 5274 Embryophyte View MSA
123427798 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain