Gene : Thecc1EG015501 T. cacao v1.1
Defline:  (1 of 6) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) Genomic Order:  2073
Name:  ? Thecc1EG015501 Secondary Identifier:  ? PAC:27451315
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015501 0.5kb upstream 0.5kb upstream 3080 true scaffold_3: 28241220-28244299 Theobroma cacao
Thecc1EG015501 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 28241220-28241719 Theobroma cacao
Thecc1EG015501 0.5kb downstream 0.5kb downstream 3080 true scaffold_3: 28241720-28244799 Theobroma cacao
Thecc1EG015501 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 28244300-28244799 Theobroma cacao
Thecc1EG015501 1.0kb upstream 1.0kb upstream 3580 true scaffold_3: 28240720-28244299 Theobroma cacao
Thecc1EG015501 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 28240720-28241719 Theobroma cacao
Thecc1EG015501 1.0kb downstream 1.0kb downstream 3580 true scaffold_3: 28241720-28245299 Theobroma cacao
Thecc1EG015501 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 28244300-28245299 Theobroma cacao
Thecc1EG015501 2.0kb upstream 2.0kb upstream 4580 true scaffold_3: 28239720-28244299 Theobroma cacao
Thecc1EG015501 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 28239720-28241719 Theobroma cacao
Thecc1EG015501 2.0kb downstream 2.0kb downstream 4580 true scaffold_3: 28241720-28246299 Theobroma cacao
Thecc1EG015501 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 28244300-28246299 Theobroma cacao
Thecc1EG015501 5.0kb upstream 5.0kb upstream 7580 true scaffold_3: 28236720-28244299 Theobroma cacao
Thecc1EG015501 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 28236720-28241719 Theobroma cacao
Thecc1EG015501 5.0kb downstream 5.0kb downstream 7580 true scaffold_3: 28241720-28249299 Theobroma cacao
Thecc1EG015501 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 28244300-28249299 Theobroma cacao
Thecc1EG015501 10.0kb upstream 10.0kb upstream 12580 true scaffold_3: 28231720-28244299 Theobroma cacao
Thecc1EG015501 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 28231720-28241719 Theobroma cacao
Thecc1EG015501 10.0kb downstream 10.0kb downstream 12580 true scaffold_3: 28241720-28254299 Theobroma cacao
Thecc1EG015501 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 28244300-28254299 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825841 5264 Brassicales-Malvales View MSA
124320782 5266 SBM View MSA
124168772 5268 Malvidae View MSA
124063752 5270 Rosid View MSA
123741544 5271 Pentapetalae View MSA
122770076 5272 Eudicot View MSA
122042534 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121350049 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain