Gene : Thecc1EG015877 T. cacao v1.1
Defline:  (1 of 1) PTHR10809:SF42 - VESICLE-ASSOCIATED PROTEIN 2-1 Genomic Order:  2406
Name:  ? Thecc1EG015877 Secondary Identifier:  ? PAC:27449290
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015877 0.5kb upstream 0.5kb upstream 4159 true scaffold_3: 30092007-30096165 Theobroma cacao
Thecc1EG015877 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 30095666-30096165 Theobroma cacao
Thecc1EG015877 0.5kb downstream 0.5kb downstream 4159 true scaffold_3: 30091507-30095665 Theobroma cacao
Thecc1EG015877 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 30091507-30092006 Theobroma cacao
Thecc1EG015877 1.0kb upstream 1.0kb upstream 4659 true scaffold_3: 30092007-30096665 Theobroma cacao
Thecc1EG015877 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 30095666-30096665 Theobroma cacao
Thecc1EG015877 1.0kb downstream 1.0kb downstream 4659 true scaffold_3: 30091007-30095665 Theobroma cacao
Thecc1EG015877 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 30091007-30092006 Theobroma cacao
Thecc1EG015877 2.0kb upstream 2.0kb upstream 5659 true scaffold_3: 30092007-30097665 Theobroma cacao
Thecc1EG015877 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 30095666-30097665 Theobroma cacao
Thecc1EG015877 2.0kb downstream 2.0kb downstream 5659 true scaffold_3: 30090007-30095665 Theobroma cacao
Thecc1EG015877 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 30090007-30092006 Theobroma cacao
Thecc1EG015877 5.0kb upstream 5.0kb upstream 8659 true scaffold_3: 30092007-30100665 Theobroma cacao
Thecc1EG015877 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 30095666-30100665 Theobroma cacao
Thecc1EG015877 5.0kb downstream 5.0kb downstream 8659 true scaffold_3: 30087007-30095665 Theobroma cacao
Thecc1EG015877 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 30087007-30092006 Theobroma cacao
Thecc1EG015877 10.0kb upstream 10.0kb upstream 13659 true scaffold_3: 30092007-30105665 Theobroma cacao
Thecc1EG015877 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 30095666-30105665 Theobroma cacao
Thecc1EG015877 10.0kb downstream 10.0kb downstream 13659 true scaffold_3: 30082007-30095665 Theobroma cacao
Thecc1EG015877 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 30082007-30092006 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832366 5264 Brassicales-Malvales View MSA
124340523 5266 SBM View MSA
124238893 5268 Malvidae View MSA
124070661 5270 Rosid View MSA
123750934 5271 Pentapetalae View MSA
122796486 5272 Eudicot View MSA
122049501 5273 Angiosperm View MSA
121311441 5274 Embryophyte View MSA
123348736 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain