Gene : Thecc1EG016057 T. cacao v1.1
Defline:  (1 of 7) PF02892//PF04937//PF05699 - BED zinc finger (zf-BED) // Protein of unknown function (DUF 659) (DUF659) // hAT family C-terminal dimerisation region (Dimer_Tnp_hAT) Genomic Order:  2566
Name:  ? Thecc1EG016057 Secondary Identifier:  ? PAC:27447776
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016057 0.5kb upstream 0.5kb upstream 4881 true scaffold_3: 31054562-31059442 Theobroma cacao
Thecc1EG016057 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 31054562-31055061 Theobroma cacao
Thecc1EG016057 0.5kb downstream 0.5kb downstream 4881 true scaffold_3: 31055062-31059942 Theobroma cacao
Thecc1EG016057 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 31059443-31059942 Theobroma cacao
Thecc1EG016057 1.0kb upstream 1.0kb upstream 5381 true scaffold_3: 31054062-31059442 Theobroma cacao
Thecc1EG016057 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 31054062-31055061 Theobroma cacao
Thecc1EG016057 1.0kb downstream 1.0kb downstream 5381 true scaffold_3: 31055062-31060442 Theobroma cacao
Thecc1EG016057 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 31059443-31060442 Theobroma cacao
Thecc1EG016057 2.0kb upstream 2.0kb upstream 6381 true scaffold_3: 31053062-31059442 Theobroma cacao
Thecc1EG016057 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 31053062-31055061 Theobroma cacao
Thecc1EG016057 2.0kb downstream 2.0kb downstream 6381 true scaffold_3: 31055062-31061442 Theobroma cacao
Thecc1EG016057 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 31059443-31061442 Theobroma cacao
Thecc1EG016057 5.0kb upstream 5.0kb upstream 9381 true scaffold_3: 31050062-31059442 Theobroma cacao
Thecc1EG016057 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 31050062-31055061 Theobroma cacao
Thecc1EG016057 5.0kb downstream 5.0kb downstream 9381 true scaffold_3: 31055062-31064442 Theobroma cacao
Thecc1EG016057 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 31059443-31064442 Theobroma cacao
Thecc1EG016057 10.0kb upstream 10.0kb upstream 14381 true scaffold_3: 31045062-31059442 Theobroma cacao
Thecc1EG016057 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 31045062-31055061 Theobroma cacao
Thecc1EG016057 10.0kb downstream 10.0kb downstream 14381 true scaffold_3: 31055062-31069442 Theobroma cacao
Thecc1EG016057 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 31059443-31069442 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840638 5264 Brassicales-Malvales View MSA
124339493 5266 SBM View MSA
124251676 5268 Malvidae View MSA
124071231 5270 Rosid View MSA
123752967 5271 Pentapetalae View MSA
122794205 5272 Eudicot View MSA
122051703 5273 Angiosperm View MSA
121347820 5274 Embryophyte View MSA
123428458 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain