Gene : Thecc1EG016459 T. cacao v1.1
Defline:  (1 of 1) 2.7.8.11//6.2.1.3 - CDP-diacylglycerol--inositol 3-phosphatidyltransferase / Phosphatidylinositol synthase // Long-chain-fatty-acid--CoA ligase / Lignoceroyl-CoA synthase Genomic Order:  2925
Name:  ? Thecc1EG016459 Secondary Identifier:  ? PAC:27449139
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Sequence Feature Displayer

Ontology Annotation Displayer

16 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1121 Theobroma cacao pathologic  
Tcacao PWY-321 Theobroma cacao pathologic  
Tcacao PWY-5136 Theobroma cacao pathologic  
Tcacao PWY-5143 Theobroma cacao pathologic  
Tcacao PWY-5147 Theobroma cacao pathologic  
Tcacao PWY-5156 Theobroma cacao pathologic  
Tcacao PWY-561 Theobroma cacao pathologic  
Tcacao PWY-5885 Theobroma cacao pathologic  
Tcacao PWY-5971 Theobroma cacao pathologic  
Tcacao PWY-5989 Theobroma cacao pathologic  
Tcacao PWY-6351 Theobroma cacao pathologic  
Tcacao PWY-6352 Theobroma cacao pathologic  
Tcacao PWY66-389 Theobroma cacao pathologic  
Tcacao PWY-6733 Theobroma cacao pathologic  
Tcacao PWY-6803 Theobroma cacao pathologic  
Tcacao PWY-7625 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016459 0.5kb upstream 0.5kb upstream 10710 true scaffold_3: 32965674-32976383 Theobroma cacao
Thecc1EG016459 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 32975884-32976383 Theobroma cacao
Thecc1EG016459 0.5kb downstream 0.5kb downstream 10710 true scaffold_3: 32965174-32975883 Theobroma cacao
Thecc1EG016459 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 32965174-32965673 Theobroma cacao
Thecc1EG016459 1.0kb upstream 1.0kb upstream 11210 true scaffold_3: 32965674-32976883 Theobroma cacao
Thecc1EG016459 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 32975884-32976883 Theobroma cacao
Thecc1EG016459 1.0kb downstream 1.0kb downstream 11210 true scaffold_3: 32964674-32975883 Theobroma cacao
Thecc1EG016459 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 32964674-32965673 Theobroma cacao
Thecc1EG016459 2.0kb upstream 2.0kb upstream 12210 true scaffold_3: 32965674-32977883 Theobroma cacao
Thecc1EG016459 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 32975884-32977883 Theobroma cacao
Thecc1EG016459 2.0kb downstream 2.0kb downstream 12210 true scaffold_3: 32963674-32975883 Theobroma cacao
Thecc1EG016459 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 32963674-32965673 Theobroma cacao
Thecc1EG016459 5.0kb upstream 5.0kb upstream 15210 true scaffold_3: 32965674-32980883 Theobroma cacao
Thecc1EG016459 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 32975884-32980883 Theobroma cacao
Thecc1EG016459 5.0kb downstream 5.0kb downstream 15210 true scaffold_3: 32960674-32975883 Theobroma cacao
Thecc1EG016459 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 32960674-32965673 Theobroma cacao
Thecc1EG016459 10.0kb upstream 10.0kb upstream 20210 true scaffold_3: 32965674-32985883 Theobroma cacao
Thecc1EG016459 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 32975884-32985883 Theobroma cacao
Thecc1EG016459 10.0kb downstream 10.0kb downstream 20210 true scaffold_3: 32955674-32975883 Theobroma cacao
Thecc1EG016459 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 32955674-32965673 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841490 5264 Brassicales-Malvales View MSA
124338574 5266 SBM View MSA
124245132 5268 Malvidae View MSA
124069008 5270 Rosid View MSA
123751064 5271 Pentapetalae View MSA
122791747 5272 Eudicot View MSA
122047711 5273 Angiosperm View MSA
121350386 5274 Embryophyte View MSA
123426542 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain