Gene : Thecc1EG016426 T. cacao v1.1

Defline:  (1 of 59) PF03106 - WRKY DNA -binding domain (WRKY) Genomic Order:  2900
Name:  ? Thecc1EG016426 Secondary Identifier:  ? PAC:27448060

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016426 0.5kb upstream 0.5kb upstream 2574 true scaffold_3: 32846398-32848971 Theobroma cacao
Thecc1EG016426 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 32848472-32848971 Theobroma cacao
Thecc1EG016426 0.5kb downstream 0.5kb downstream 2574 true scaffold_3: 32845898-32848471 Theobroma cacao
Thecc1EG016426 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 32845898-32846397 Theobroma cacao
Thecc1EG016426 1.0kb upstream 1.0kb upstream 3074 true scaffold_3: 32846398-32849471 Theobroma cacao
Thecc1EG016426 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 32848472-32849471 Theobroma cacao
Thecc1EG016426 1.0kb downstream 1.0kb downstream 3074 true scaffold_3: 32845398-32848471 Theobroma cacao
Thecc1EG016426 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 32845398-32846397 Theobroma cacao
Thecc1EG016426 2.0kb upstream 2.0kb upstream 4074 true scaffold_3: 32846398-32850471 Theobroma cacao
Thecc1EG016426 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 32848472-32850471 Theobroma cacao
Thecc1EG016426 2.0kb downstream 2.0kb downstream 4074 true scaffold_3: 32844398-32848471 Theobroma cacao
Thecc1EG016426 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 32844398-32846397 Theobroma cacao
Thecc1EG016426 5.0kb upstream 5.0kb upstream 7074 true scaffold_3: 32846398-32853471 Theobroma cacao
Thecc1EG016426 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 32848472-32853471 Theobroma cacao
Thecc1EG016426 5.0kb downstream 5.0kb downstream 7074 true scaffold_3: 32841398-32848471 Theobroma cacao
Thecc1EG016426 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 32841398-32846397 Theobroma cacao
Thecc1EG016426 10.0kb upstream 10.0kb upstream 12074 true scaffold_3: 32846398-32858471 Theobroma cacao
Thecc1EG016426 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 32848472-32858471 Theobroma cacao
Thecc1EG016426 10.0kb downstream 10.0kb downstream 12074 true scaffold_3: 32836398-32848471 Theobroma cacao
Thecc1EG016426 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 32836398-32846397 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840808 5264 Brassicales-Malvales View MSA
124349002 5266 SBM View MSA
124251852 5268 Malvidae View MSA
124070088 5270 Rosid View MSA
123748507 5271 Pentapetalae View MSA
122792318 5272 Eudicot View MSA
122042509 5273 Angiosperm View MSA
121351570 5274 Embryophyte View MSA
123382232 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain