Gene : Thecc1EG016325 T. cacao v1.1
Defline:  (1 of 2) 1.14.13.129 - Beta-carotene 3-hydroxylase / Beta-carotene 3,3'-monooxygenase Genomic Order:  2806
Name:  ? Thecc1EG016325 Secondary Identifier:  ? PAC:27447707
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao CAROTENOID-PWY Theobroma cacao pathologic  
Tcacao PWY-5944 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016325 0.5kb upstream 0.5kb upstream 2630 true scaffold_3: 32372248-32374877 Theobroma cacao
Thecc1EG016325 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 32374378-32374877 Theobroma cacao
Thecc1EG016325 0.5kb downstream 0.5kb downstream 2630 true scaffold_3: 32371748-32374377 Theobroma cacao
Thecc1EG016325 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 32371748-32372247 Theobroma cacao
Thecc1EG016325 1.0kb upstream 1.0kb upstream 3130 true scaffold_3: 32372248-32375377 Theobroma cacao
Thecc1EG016325 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 32374378-32375377 Theobroma cacao
Thecc1EG016325 1.0kb downstream 1.0kb downstream 3130 true scaffold_3: 32371248-32374377 Theobroma cacao
Thecc1EG016325 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 32371248-32372247 Theobroma cacao
Thecc1EG016325 2.0kb upstream 2.0kb upstream 4130 true scaffold_3: 32372248-32376377 Theobroma cacao
Thecc1EG016325 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 32374378-32376377 Theobroma cacao
Thecc1EG016325 2.0kb downstream 2.0kb downstream 4130 true scaffold_3: 32370248-32374377 Theobroma cacao
Thecc1EG016325 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 32370248-32372247 Theobroma cacao
Thecc1EG016325 5.0kb upstream 5.0kb upstream 7130 true scaffold_3: 32372248-32379377 Theobroma cacao
Thecc1EG016325 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 32374378-32379377 Theobroma cacao
Thecc1EG016325 5.0kb downstream 5.0kb downstream 7130 true scaffold_3: 32367248-32374377 Theobroma cacao
Thecc1EG016325 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 32367248-32372247 Theobroma cacao
Thecc1EG016325 10.0kb upstream 10.0kb upstream 12130 true scaffold_3: 32372248-32384377 Theobroma cacao
Thecc1EG016325 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 32374378-32384377 Theobroma cacao
Thecc1EG016325 10.0kb downstream 10.0kb downstream 12130 true scaffold_3: 32362248-32374377 Theobroma cacao
Thecc1EG016325 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 32362248-32372247 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665666 5273 Angiosperm View MSA
123825817 5264 Brassicales-Malvales View MSA
124320770 5266 SBM View MSA
124168766 5268 Malvidae View MSA
124051338 5270 Rosid View MSA
123620121 5271 Pentapetalae View MSA
122654537 5272 Eudicot View MSA
123429104 5275 Viridiplantae View MSA
121351007 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain