Gene : Thecc1EG016591 T. cacao v1.1
Defline:  (1 of 1) PTHR21087//PTHR21087:SF0 - SHIKIMATE KINASE // INACTIVE SHIKIMATE KINASE LIKE 2, CHLOROPLASTIC-RELATED Genomic Order:  3045
Name:  ? Thecc1EG016591 Secondary Identifier:  ? PAC:27448477
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016591 0.5kb upstream 0.5kb upstream 6274 true scaffold_3: 33546885-33553158 Theobroma cacao
Thecc1EG016591 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 33546885-33547384 Theobroma cacao
Thecc1EG016591 0.5kb downstream 0.5kb downstream 6274 true scaffold_3: 33547385-33553658 Theobroma cacao
Thecc1EG016591 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 33553159-33553658 Theobroma cacao
Thecc1EG016591 1.0kb upstream 1.0kb upstream 6774 true scaffold_3: 33546385-33553158 Theobroma cacao
Thecc1EG016591 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 33546385-33547384 Theobroma cacao
Thecc1EG016591 1.0kb downstream 1.0kb downstream 6774 true scaffold_3: 33547385-33554158 Theobroma cacao
Thecc1EG016591 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 33553159-33554158 Theobroma cacao
Thecc1EG016591 2.0kb upstream 2.0kb upstream 7774 true scaffold_3: 33545385-33553158 Theobroma cacao
Thecc1EG016591 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 33545385-33547384 Theobroma cacao
Thecc1EG016591 2.0kb downstream 2.0kb downstream 7774 true scaffold_3: 33547385-33555158 Theobroma cacao
Thecc1EG016591 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 33553159-33555158 Theobroma cacao
Thecc1EG016591 5.0kb upstream 5.0kb upstream 10774 true scaffold_3: 33542385-33553158 Theobroma cacao
Thecc1EG016591 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 33542385-33547384 Theobroma cacao
Thecc1EG016591 5.0kb downstream 5.0kb downstream 10774 true scaffold_3: 33547385-33558158 Theobroma cacao
Thecc1EG016591 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 33553159-33558158 Theobroma cacao
Thecc1EG016591 10.0kb upstream 10.0kb upstream 15774 true scaffold_3: 33537385-33553158 Theobroma cacao
Thecc1EG016591 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 33537385-33547384 Theobroma cacao
Thecc1EG016591 10.0kb downstream 10.0kb downstream 15774 true scaffold_3: 33547385-33563158 Theobroma cacao
Thecc1EG016591 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 33553159-33563158 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827628 5264 Brassicales-Malvales View MSA
124339752 5266 SBM View MSA
124237688 5268 Malvidae View MSA
124072915 5270 Rosid View MSA
123746382 5271 Pentapetalae View MSA
122790414 5272 Eudicot View MSA
122043641 5273 Angiosperm View MSA
121347570 5274 Embryophyte View MSA
123427676 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain