Gene : Thecc1EG047017 T. cacao v1.1
Defline:  (1 of 1) K08740 - DNA mismatch repair protein MSH4 (MSH4) Genomic Order:  2460
Name:  ? Thecc1EG047017 Secondary Identifier:  ? PAC:27447806
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG047017 0.5kb upstream 0.5kb upstream 10332 true scaffold_3: 30450076-30460407 Theobroma cacao
Thecc1EG047017 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 30459908-30460407 Theobroma cacao
Thecc1EG047017 0.5kb downstream 0.5kb downstream 10332 true scaffold_3: 30449576-30459907 Theobroma cacao
Thecc1EG047017 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 30449576-30450075 Theobroma cacao
Thecc1EG047017 1.0kb upstream 1.0kb upstream 10832 true scaffold_3: 30450076-30460907 Theobroma cacao
Thecc1EG047017 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 30459908-30460907 Theobroma cacao
Thecc1EG047017 1.0kb downstream 1.0kb downstream 10832 true scaffold_3: 30449076-30459907 Theobroma cacao
Thecc1EG047017 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 30449076-30450075 Theobroma cacao
Thecc1EG047017 2.0kb upstream 2.0kb upstream 11832 true scaffold_3: 30450076-30461907 Theobroma cacao
Thecc1EG047017 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 30459908-30461907 Theobroma cacao
Thecc1EG047017 2.0kb downstream 2.0kb downstream 11832 true scaffold_3: 30448076-30459907 Theobroma cacao
Thecc1EG047017 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 30448076-30450075 Theobroma cacao
Thecc1EG047017 5.0kb upstream 5.0kb upstream 14832 true scaffold_3: 30450076-30464907 Theobroma cacao
Thecc1EG047017 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 30459908-30464907 Theobroma cacao
Thecc1EG047017 5.0kb downstream 5.0kb downstream 14832 true scaffold_3: 30445076-30459907 Theobroma cacao
Thecc1EG047017 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 30445076-30450075 Theobroma cacao
Thecc1EG047017 10.0kb upstream 10.0kb upstream 19832 true scaffold_3: 30450076-30469907 Theobroma cacao
Thecc1EG047017 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 30459908-30469907 Theobroma cacao
Thecc1EG047017 10.0kb downstream 10.0kb downstream 19832 true scaffold_3: 30440076-30459907 Theobroma cacao
Thecc1EG047017 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 30440076-30450075 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833608 5264 Brassicales-Malvales View MSA
124343238 5266 SBM View MSA
124241911 5268 Malvidae View MSA
124050311 5270 Rosid View MSA
123737053 5271 Pentapetalae View MSA
122788713 5272 Eudicot View MSA
122042795 5273 Angiosperm View MSA
121346371 5274 Embryophyte View MSA
123424062 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain