Gene : Thecc1EG016928 T. cacao v1.1
Defline:  (1 of 1) PTHR10168//PTHR10168:SF104 - GLUTAREDOXIN // SUBFAMILY NOT NAMED Genomic Order:  139
Name:  ? Thecc1EG016928 Secondary Identifier:  ? PAC:27452627
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao THIOREDOX-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016928 0.5kb upstream 0.5kb upstream 2583 true scaffold_4: 911909-914491 Theobroma cacao
Thecc1EG016928 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 913992-914491 Theobroma cacao
Thecc1EG016928 0.5kb downstream 0.5kb downstream 2583 true scaffold_4: 911409-913991 Theobroma cacao
Thecc1EG016928 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 911409-911908 Theobroma cacao
Thecc1EG016928 1.0kb upstream 1.0kb upstream 3083 true scaffold_4: 911909-914991 Theobroma cacao
Thecc1EG016928 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 913992-914991 Theobroma cacao
Thecc1EG016928 1.0kb downstream 1.0kb downstream 3083 true scaffold_4: 910909-913991 Theobroma cacao
Thecc1EG016928 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 910909-911908 Theobroma cacao
Thecc1EG016928 2.0kb upstream 2.0kb upstream 4083 true scaffold_4: 911909-915991 Theobroma cacao
Thecc1EG016928 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 913992-915991 Theobroma cacao
Thecc1EG016928 2.0kb downstream 2.0kb downstream 4083 true scaffold_4: 909909-913991 Theobroma cacao
Thecc1EG016928 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 909909-911908 Theobroma cacao
Thecc1EG016928 5.0kb upstream 5.0kb upstream 7083 true scaffold_4: 911909-918991 Theobroma cacao
Thecc1EG016928 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 913992-918991 Theobroma cacao
Thecc1EG016928 5.0kb downstream 5.0kb downstream 7083 true scaffold_4: 906909-913991 Theobroma cacao
Thecc1EG016928 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 906909-911908 Theobroma cacao
Thecc1EG016928 10.0kb upstream 10.0kb upstream 12083 true scaffold_4: 911909-923991 Theobroma cacao
Thecc1EG016928 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 913992-923991 Theobroma cacao
Thecc1EG016928 10.0kb downstream 10.0kb downstream 12083 true scaffold_4: 901909-913991 Theobroma cacao
Thecc1EG016928 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 901909-911908 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833232 5264 Brassicales-Malvales View MSA
124346532 5266 SBM View MSA
124248160 5268 Malvidae View MSA
124065401 5270 Rosid View MSA
123746542 5271 Pentapetalae View MSA
122795168 5272 Eudicot View MSA
122042909 5273 Angiosperm View MSA
121349337 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain