Gene : Thecc1EG017254 T. cacao v1.1
Defline:  Regulator of nonsense transcripts 3A Genomic Order:  394
Name:  ? Thecc1EG017254 Secondary Identifier:  ? PAC:27452704
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG017254 0.5kb upstream 0.5kb upstream 5771 true scaffold_4: 2585484-2591254 Theobroma cacao
Thecc1EG017254 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 2590755-2591254 Theobroma cacao
Thecc1EG017254 0.5kb downstream 0.5kb downstream 5771 true scaffold_4: 2584984-2590754 Theobroma cacao
Thecc1EG017254 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 2584984-2585483 Theobroma cacao
Thecc1EG017254 1.0kb upstream 1.0kb upstream 6271 true scaffold_4: 2585484-2591754 Theobroma cacao
Thecc1EG017254 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 2590755-2591754 Theobroma cacao
Thecc1EG017254 1.0kb downstream 1.0kb downstream 6271 true scaffold_4: 2584484-2590754 Theobroma cacao
Thecc1EG017254 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 2584484-2585483 Theobroma cacao
Thecc1EG017254 2.0kb upstream 2.0kb upstream 7271 true scaffold_4: 2585484-2592754 Theobroma cacao
Thecc1EG017254 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 2590755-2592754 Theobroma cacao
Thecc1EG017254 2.0kb downstream 2.0kb downstream 7271 true scaffold_4: 2583484-2590754 Theobroma cacao
Thecc1EG017254 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 2583484-2585483 Theobroma cacao
Thecc1EG017254 5.0kb upstream 5.0kb upstream 10271 true scaffold_4: 2585484-2595754 Theobroma cacao
Thecc1EG017254 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 2590755-2595754 Theobroma cacao
Thecc1EG017254 5.0kb downstream 5.0kb downstream 10271 true scaffold_4: 2580484-2590754 Theobroma cacao
Thecc1EG017254 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 2580484-2585483 Theobroma cacao
Thecc1EG017254 10.0kb upstream 10.0kb upstream 15271 true scaffold_4: 2585484-2600754 Theobroma cacao
Thecc1EG017254 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 2590755-2600754 Theobroma cacao
Thecc1EG017254 10.0kb downstream 10.0kb downstream 15271 true scaffold_4: 2575484-2590754 Theobroma cacao
Thecc1EG017254 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 2575484-2585483 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040977 5273 Angiosperm View MSA
123827201 5264 Brassicales-Malvales View MSA
124349318 5266 SBM View MSA
124252020 5268 Malvidae View MSA
124070978 5270 Rosid View MSA
123741365 5271 Pentapetalae View MSA
122790161 5272 Eudicot View MSA
121309780 5274 Embryophyte View MSA
123347441 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain