Gene : Thecc1EG017352 T. cacao v1.1
Defline:  (1 of 119) PF00847 - AP2 domain (AP2) Genomic Order:  477
Name:  ? Thecc1EG017352 Secondary Identifier:  ? PAC:27454342
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG017352 0.5kb upstream 0.5kb upstream 4608 true scaffold_4: 3194605-3199212 Theobroma cacao
Thecc1EG017352 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 3194605-3195104 Theobroma cacao
Thecc1EG017352 0.5kb downstream 0.5kb downstream 4608 true scaffold_4: 3195105-3199712 Theobroma cacao
Thecc1EG017352 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 3199213-3199712 Theobroma cacao
Thecc1EG017352 1.0kb upstream 1.0kb upstream 5108 true scaffold_4: 3194105-3199212 Theobroma cacao
Thecc1EG017352 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 3194105-3195104 Theobroma cacao
Thecc1EG017352 1.0kb downstream 1.0kb downstream 5108 true scaffold_4: 3195105-3200212 Theobroma cacao
Thecc1EG017352 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 3199213-3200212 Theobroma cacao
Thecc1EG017352 2.0kb upstream 2.0kb upstream 6108 true scaffold_4: 3193105-3199212 Theobroma cacao
Thecc1EG017352 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 3193105-3195104 Theobroma cacao
Thecc1EG017352 2.0kb downstream 2.0kb downstream 6108 true scaffold_4: 3195105-3201212 Theobroma cacao
Thecc1EG017352 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 3199213-3201212 Theobroma cacao
Thecc1EG017352 5.0kb upstream 5.0kb upstream 9108 true scaffold_4: 3190105-3199212 Theobroma cacao
Thecc1EG017352 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 3190105-3195104 Theobroma cacao
Thecc1EG017352 5.0kb downstream 5.0kb downstream 9108 true scaffold_4: 3195105-3204212 Theobroma cacao
Thecc1EG017352 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 3199213-3204212 Theobroma cacao
Thecc1EG017352 10.0kb upstream 10.0kb upstream 14108 true scaffold_4: 3185105-3199212 Theobroma cacao
Thecc1EG017352 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 3185105-3195104 Theobroma cacao
Thecc1EG017352 10.0kb downstream 10.0kb downstream 14108 true scaffold_4: 3195105-3209212 Theobroma cacao
Thecc1EG017352 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 3199213-3209212 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123819419 5264 Brassicales-Malvales Singleton cluster - no MSA
124348895 5266 SBM View MSA
124248939 5268 Malvidae View MSA
124073259 5270 Rosid View MSA
123738073 5271 Pentapetalae View MSA
122789741 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain