Gene : Thecc1EG019010 T. cacao v1.1
Defline:  (1 of 1) K10691 - E3 ubiquitin-protein ligase UBR4 (UBR4, ZUBR1) Genomic Order:  1123
Name:  ? Thecc1EG019010 Secondary Identifier:  ? PAC:27453464
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7511 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019010 0.5kb upstream 0.5kb upstream 36197 true scaffold_4: 19566276-19602472 Theobroma cacao
Thecc1EG019010 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 19566276-19566775 Theobroma cacao
Thecc1EG019010 0.5kb downstream 0.5kb downstream 36197 true scaffold_4: 19566776-19602972 Theobroma cacao
Thecc1EG019010 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 19602473-19602972 Theobroma cacao
Thecc1EG019010 1.0kb upstream 1.0kb upstream 36697 true scaffold_4: 19565776-19602472 Theobroma cacao
Thecc1EG019010 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 19565776-19566775 Theobroma cacao
Thecc1EG019010 1.0kb downstream 1.0kb downstream 36697 true scaffold_4: 19566776-19603472 Theobroma cacao
Thecc1EG019010 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 19602473-19603472 Theobroma cacao
Thecc1EG019010 2.0kb upstream 2.0kb upstream 37697 true scaffold_4: 19564776-19602472 Theobroma cacao
Thecc1EG019010 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 19564776-19566775 Theobroma cacao
Thecc1EG019010 2.0kb downstream 2.0kb downstream 37697 true scaffold_4: 19566776-19604472 Theobroma cacao
Thecc1EG019010 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 19602473-19604472 Theobroma cacao
Thecc1EG019010 5.0kb upstream 5.0kb upstream 40697 true scaffold_4: 19561776-19602472 Theobroma cacao
Thecc1EG019010 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 19561776-19566775 Theobroma cacao
Thecc1EG019010 5.0kb downstream 5.0kb downstream 40697 true scaffold_4: 19566776-19607472 Theobroma cacao
Thecc1EG019010 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 19602473-19607472 Theobroma cacao
Thecc1EG019010 10.0kb upstream 10.0kb upstream 45697 true scaffold_4: 19556776-19602472 Theobroma cacao
Thecc1EG019010 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 19556776-19566775 Theobroma cacao
Thecc1EG019010 10.0kb downstream 10.0kb downstream 45697 true scaffold_4: 19566776-19612472 Theobroma cacao
Thecc1EG019010 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 19602473-19612472 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828628 5264 Brassicales-Malvales View MSA
124337601 5266 SBM View MSA
124243657 5268 Malvidae View MSA
124068853 5270 Rosid View MSA
123737535 5271 Pentapetalae View MSA
122791099 5272 Eudicot View MSA
122042481 5273 Angiosperm View MSA
121347237 5274 Embryophyte View MSA
123425333 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain