Gene : Thecc1EG018745 T. cacao v1.1
Defline:  (1 of 1) PTHR10357//PTHR10357:SF157 - ALPHA-AMYLASE // SUBFAMILY NOT NAMED Genomic Order:  987
Name:  ? Thecc1EG018745 Secondary Identifier:  ? PAC:27455444
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG018745 0.5kb upstream 0.5kb upstream 8925 true scaffold_4: 17646477-17655401 Theobroma cacao
Thecc1EG018745 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 17654902-17655401 Theobroma cacao
Thecc1EG018745 0.5kb downstream 0.5kb downstream 8925 true scaffold_4: 17645977-17654901 Theobroma cacao
Thecc1EG018745 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 17645977-17646476 Theobroma cacao
Thecc1EG018745 1.0kb upstream 1.0kb upstream 9425 true scaffold_4: 17646477-17655901 Theobroma cacao
Thecc1EG018745 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 17654902-17655901 Theobroma cacao
Thecc1EG018745 1.0kb downstream 1.0kb downstream 9425 true scaffold_4: 17645477-17654901 Theobroma cacao
Thecc1EG018745 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 17645477-17646476 Theobroma cacao
Thecc1EG018745 2.0kb upstream 2.0kb upstream 10425 true scaffold_4: 17646477-17656901 Theobroma cacao
Thecc1EG018745 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 17654902-17656901 Theobroma cacao
Thecc1EG018745 2.0kb downstream 2.0kb downstream 10425 true scaffold_4: 17644477-17654901 Theobroma cacao
Thecc1EG018745 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 17644477-17646476 Theobroma cacao
Thecc1EG018745 5.0kb upstream 5.0kb upstream 13425 true scaffold_4: 17646477-17659901 Theobroma cacao
Thecc1EG018745 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 17654902-17659901 Theobroma cacao
Thecc1EG018745 5.0kb downstream 5.0kb downstream 13425 true scaffold_4: 17641477-17654901 Theobroma cacao
Thecc1EG018745 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 17641477-17646476 Theobroma cacao
Thecc1EG018745 10.0kb upstream 10.0kb upstream 18425 true scaffold_4: 17646477-17664901 Theobroma cacao
Thecc1EG018745 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 17654902-17664901 Theobroma cacao
Thecc1EG018745 10.0kb downstream 10.0kb downstream 18425 true scaffold_4: 17636477-17654901 Theobroma cacao
Thecc1EG018745 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 17636477-17646476 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123819639 5264 Brassicales-Malvales Singleton cluster - no MSA
124315883 5266 SBM Singleton cluster - no MSA
124164749 5268 Malvidae Singleton cluster - no MSA
123888483 5270 Rosid Singleton cluster - no MSA
123751733 5271 Pentapetalae View MSA
122785800 5272 Eudicot View MSA
122050125 5273 Angiosperm View MSA
121348688 5274 Embryophyte View MSA
123427521 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain