Gene : Thecc1EG019211 T. cacao v1.1
Defline:  (1 of 1) PTHR23315//PTHR23315:SF65 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // ARM REPEAT SUPERFAMILY PROTEIN Genomic Order:  1248
Name:  ? Thecc1EG019211 Secondary Identifier:  ? PAC:27452929
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7511 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019211 0.5kb upstream 0.5kb upstream 3719 true scaffold_4: 21041802-21045520 Theobroma cacao
Thecc1EG019211 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 21041802-21042301 Theobroma cacao
Thecc1EG019211 0.5kb downstream 0.5kb downstream 3719 true scaffold_4: 21042302-21046020 Theobroma cacao
Thecc1EG019211 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 21045521-21046020 Theobroma cacao
Thecc1EG019211 1.0kb upstream 1.0kb upstream 4219 true scaffold_4: 21041302-21045520 Theobroma cacao
Thecc1EG019211 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 21041302-21042301 Theobroma cacao
Thecc1EG019211 1.0kb downstream 1.0kb downstream 4219 true scaffold_4: 21042302-21046520 Theobroma cacao
Thecc1EG019211 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 21045521-21046520 Theobroma cacao
Thecc1EG019211 2.0kb upstream 2.0kb upstream 5219 true scaffold_4: 21040302-21045520 Theobroma cacao
Thecc1EG019211 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 21040302-21042301 Theobroma cacao
Thecc1EG019211 2.0kb downstream 2.0kb downstream 5219 true scaffold_4: 21042302-21047520 Theobroma cacao
Thecc1EG019211 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 21045521-21047520 Theobroma cacao
Thecc1EG019211 5.0kb upstream 5.0kb upstream 8219 true scaffold_4: 21037302-21045520 Theobroma cacao
Thecc1EG019211 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 21037302-21042301 Theobroma cacao
Thecc1EG019211 5.0kb downstream 5.0kb downstream 8219 true scaffold_4: 21042302-21050520 Theobroma cacao
Thecc1EG019211 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 21045521-21050520 Theobroma cacao
Thecc1EG019211 10.0kb upstream 10.0kb upstream 13219 true scaffold_4: 21032302-21045520 Theobroma cacao
Thecc1EG019211 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 21032302-21042301 Theobroma cacao
Thecc1EG019211 10.0kb downstream 10.0kb downstream 13219 true scaffold_4: 21042302-21055520 Theobroma cacao
Thecc1EG019211 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 21045521-21055520 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841075 5264 Brassicales-Malvales View MSA
124339513 5266 SBM View MSA
124250559 5268 Malvidae View MSA
124062792 5270 Rosid View MSA
123747212 5271 Pentapetalae View MSA
122790234 5272 Eudicot View MSA
122044762 5273 Angiosperm View MSA
121310337 5274 Embryophyte View MSA
123347849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain