Gene : Thecc1EG019659 T. cacao v1.1

Defline:  (1 of 3) PTHR27003//PTHR27003:SF36 - FAMILY NOT NAMED // LEUCINE-RICH REPEAT PROTEIN KINASE-LIKE PROTEIN Genomic Order:  1533
Name:  ? Thecc1EG019659 Secondary Identifier:  ? PAC:27452239

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019659 0.5kb upstream 0.5kb upstream 11007 true scaffold_4: 24152996-24164002 Theobroma cacao
Thecc1EG019659 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 24163503-24164002 Theobroma cacao
Thecc1EG019659 0.5kb downstream 0.5kb downstream 11007 true scaffold_4: 24152496-24163502 Theobroma cacao
Thecc1EG019659 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 24152496-24152995 Theobroma cacao
Thecc1EG019659 1.0kb upstream 1.0kb upstream 11507 true scaffold_4: 24152996-24164502 Theobroma cacao
Thecc1EG019659 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 24163503-24164502 Theobroma cacao
Thecc1EG019659 1.0kb downstream 1.0kb downstream 11507 true scaffold_4: 24151996-24163502 Theobroma cacao
Thecc1EG019659 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 24151996-24152995 Theobroma cacao
Thecc1EG019659 2.0kb upstream 2.0kb upstream 12507 true scaffold_4: 24152996-24165502 Theobroma cacao
Thecc1EG019659 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 24163503-24165502 Theobroma cacao
Thecc1EG019659 2.0kb downstream 2.0kb downstream 12507 true scaffold_4: 24150996-24163502 Theobroma cacao
Thecc1EG019659 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 24150996-24152995 Theobroma cacao
Thecc1EG019659 5.0kb upstream 5.0kb upstream 15507 true scaffold_4: 24152996-24168502 Theobroma cacao
Thecc1EG019659 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 24163503-24168502 Theobroma cacao
Thecc1EG019659 5.0kb downstream 5.0kb downstream 15507 true scaffold_4: 24147996-24163502 Theobroma cacao
Thecc1EG019659 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 24147996-24152995 Theobroma cacao
Thecc1EG019659 10.0kb upstream 10.0kb upstream 20507 true scaffold_4: 24152996-24173502 Theobroma cacao
Thecc1EG019659 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 24163503-24173502 Theobroma cacao
Thecc1EG019659 10.0kb downstream 10.0kb downstream 20507 true scaffold_4: 24142996-24163502 Theobroma cacao
Thecc1EG019659 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 24142996-24152995 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838427 5264 Brassicales-Malvales View MSA
124345908 5266 SBM View MSA
124250402 5268 Malvidae View MSA
124062074 5270 Rosid View MSA
123750521 5271 Pentapetalae View MSA
122786028 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain