Gene : Thecc1EG019924 T. cacao v1.1
Defline:  (1 of 1) PTHR11685//PTHR11685:SF146 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Genomic Order:  1751
Name:  ? Thecc1EG019924 Secondary Identifier:  ? PAC:27452665
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019924 0.5kb upstream 0.5kb upstream 3183 true scaffold_4: 25742804-25745986 Theobroma cacao
Thecc1EG019924 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 25742804-25743303 Theobroma cacao
Thecc1EG019924 0.5kb downstream 0.5kb downstream 3183 true scaffold_4: 25743304-25746486 Theobroma cacao
Thecc1EG019924 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 25745987-25746486 Theobroma cacao
Thecc1EG019924 1.0kb upstream 1.0kb upstream 3683 true scaffold_4: 25742304-25745986 Theobroma cacao
Thecc1EG019924 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 25742304-25743303 Theobroma cacao
Thecc1EG019924 1.0kb downstream 1.0kb downstream 3683 true scaffold_4: 25743304-25746986 Theobroma cacao
Thecc1EG019924 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 25745987-25746986 Theobroma cacao
Thecc1EG019924 2.0kb upstream 2.0kb upstream 4683 true scaffold_4: 25741304-25745986 Theobroma cacao
Thecc1EG019924 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 25741304-25743303 Theobroma cacao
Thecc1EG019924 2.0kb downstream 2.0kb downstream 4683 true scaffold_4: 25743304-25747986 Theobroma cacao
Thecc1EG019924 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 25745987-25747986 Theobroma cacao
Thecc1EG019924 5.0kb upstream 5.0kb upstream 7683 true scaffold_4: 25738304-25745986 Theobroma cacao
Thecc1EG019924 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 25738304-25743303 Theobroma cacao
Thecc1EG019924 5.0kb downstream 5.0kb downstream 7683 true scaffold_4: 25743304-25750986 Theobroma cacao
Thecc1EG019924 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 25745987-25750986 Theobroma cacao
Thecc1EG019924 10.0kb upstream 10.0kb upstream 12683 true scaffold_4: 25733304-25745986 Theobroma cacao
Thecc1EG019924 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 25733304-25743303 Theobroma cacao
Thecc1EG019924 10.0kb downstream 10.0kb downstream 12683 true scaffold_4: 25743304-25755986 Theobroma cacao
Thecc1EG019924 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 25745987-25755986 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123819072 5264 Brassicales-Malvales Singleton cluster - no MSA
124348303 5266 SBM View MSA
124247335 5268 Malvidae View MSA
124068077 5270 Rosid View MSA
123752192 5271 Pentapetalae View MSA
122796967 5272 Eudicot View MSA
122046828 5273 Angiosperm View MSA
123429065 5275 Viridiplantae View MSA
121348618 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain