Gene : Thecc1EG019858 T. cacao v1.1
Defline:  (1 of 8) 1.14.19.2 - Stearoyl-[acyl-carrier-protein] 9-desaturase / Stearyl-ACP desaturase Genomic Order:  1697
Name:  ? Thecc1EG019858 Secondary Identifier:  ? PAC:27455662
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5147 Theobroma cacao pathologic  
Tcacao PWY-5156 Theobroma cacao pathologic  
Tcacao PWY-5366 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019858 0.5kb upstream 0.5kb upstream 25996 true scaffold_4: 25372868-25398863 Theobroma cacao
Thecc1EG019858 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 25398364-25398863 Theobroma cacao
Thecc1EG019858 0.5kb downstream 0.5kb downstream 25996 true scaffold_4: 25372368-25398363 Theobroma cacao
Thecc1EG019858 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 25372368-25372867 Theobroma cacao
Thecc1EG019858 1.0kb upstream 1.0kb upstream 26496 true scaffold_4: 25372868-25399363 Theobroma cacao
Thecc1EG019858 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 25398364-25399363 Theobroma cacao
Thecc1EG019858 1.0kb downstream 1.0kb downstream 26496 true scaffold_4: 25371868-25398363 Theobroma cacao
Thecc1EG019858 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 25371868-25372867 Theobroma cacao
Thecc1EG019858 2.0kb upstream 2.0kb upstream 27496 true scaffold_4: 25372868-25400363 Theobroma cacao
Thecc1EG019858 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 25398364-25400363 Theobroma cacao
Thecc1EG019858 2.0kb downstream 2.0kb downstream 27496 true scaffold_4: 25370868-25398363 Theobroma cacao
Thecc1EG019858 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 25370868-25372867 Theobroma cacao
Thecc1EG019858 5.0kb upstream 5.0kb upstream 30496 true scaffold_4: 25372868-25403363 Theobroma cacao
Thecc1EG019858 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 25398364-25403363 Theobroma cacao
Thecc1EG019858 5.0kb downstream 5.0kb downstream 30496 true scaffold_4: 25367868-25398363 Theobroma cacao
Thecc1EG019858 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 25367868-25372867 Theobroma cacao
Thecc1EG019858 10.0kb upstream 10.0kb upstream 35496 true scaffold_4: 25372868-25408363 Theobroma cacao
Thecc1EG019858 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 25398364-25408363 Theobroma cacao
Thecc1EG019858 10.0kb downstream 10.0kb downstream 35496 true scaffold_4: 25362868-25398363 Theobroma cacao
Thecc1EG019858 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 25362868-25372867 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840023 5264 Brassicales-Malvales View MSA
124345427 5266 SBM View MSA
124243967 5268 Malvidae View MSA
124069229 5270 Rosid View MSA
123745832 5271 Pentapetalae View MSA
122789548 5272 Eudicot View MSA
122047247 5273 Angiosperm View MSA
121347152 5274 Embryophyte View MSA
123428838 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain