Gene : Thecc1EG020030 T. cacao v1.1
Defline:  (1 of 37) PF03101 - FAR1 DNA-binding domain (FAR1) Genomic Order:  1832
Name:  ? Thecc1EG020030 Secondary Identifier:  ? PAC:27454012
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020030 0.5kb upstream 0.5kb upstream 4456 true scaffold_4: 26245995-26250450 Theobroma cacao
Thecc1EG020030 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 26249951-26250450 Theobroma cacao
Thecc1EG020030 0.5kb downstream 0.5kb downstream 4456 true scaffold_4: 26245495-26249950 Theobroma cacao
Thecc1EG020030 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 26245495-26245994 Theobroma cacao
Thecc1EG020030 1.0kb upstream 1.0kb upstream 4956 true scaffold_4: 26245995-26250950 Theobroma cacao
Thecc1EG020030 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 26249951-26250950 Theobroma cacao
Thecc1EG020030 1.0kb downstream 1.0kb downstream 4956 true scaffold_4: 26244995-26249950 Theobroma cacao
Thecc1EG020030 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 26244995-26245994 Theobroma cacao
Thecc1EG020030 2.0kb upstream 2.0kb upstream 5956 true scaffold_4: 26245995-26251950 Theobroma cacao
Thecc1EG020030 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 26249951-26251950 Theobroma cacao
Thecc1EG020030 2.0kb downstream 2.0kb downstream 5956 true scaffold_4: 26243995-26249950 Theobroma cacao
Thecc1EG020030 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 26243995-26245994 Theobroma cacao
Thecc1EG020030 5.0kb upstream 5.0kb upstream 8956 true scaffold_4: 26245995-26254950 Theobroma cacao
Thecc1EG020030 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 26249951-26254950 Theobroma cacao
Thecc1EG020030 5.0kb downstream 5.0kb downstream 8956 true scaffold_4: 26240995-26249950 Theobroma cacao
Thecc1EG020030 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 26240995-26245994 Theobroma cacao
Thecc1EG020030 10.0kb upstream 10.0kb upstream 13956 true scaffold_4: 26245995-26259950 Theobroma cacao
Thecc1EG020030 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 26249951-26259950 Theobroma cacao
Thecc1EG020030 10.0kb downstream 10.0kb downstream 13956 true scaffold_4: 26235995-26249950 Theobroma cacao
Thecc1EG020030 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 26235995-26245994 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123819359 5264 Brassicales-Malvales Singleton cluster - no MSA
124315623 5266 SBM Singleton cluster - no MSA
124248587 5268 Malvidae View MSA
124071849 5270 Rosid View MSA
123753434 5271 Pentapetalae View MSA
122797932 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain