Gene : Thecc1EG020034 T. cacao v1.1

Defline:  (1 of 37) PF03101 - FAR1 DNA-binding domain (FAR1) Genomic Order:  1836
Name:  ? Thecc1EG020034 Secondary Identifier:  ? PAC:27455920

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020034 0.5kb upstream 0.5kb upstream 4765 true scaffold_4: 26260846-26265610 Theobroma cacao
Thecc1EG020034 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 26265111-26265610 Theobroma cacao
Thecc1EG020034 0.5kb downstream 0.5kb downstream 4765 true scaffold_4: 26260346-26265110 Theobroma cacao
Thecc1EG020034 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 26260346-26260845 Theobroma cacao
Thecc1EG020034 1.0kb upstream 1.0kb upstream 5265 true scaffold_4: 26260846-26266110 Theobroma cacao
Thecc1EG020034 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 26265111-26266110 Theobroma cacao
Thecc1EG020034 1.0kb downstream 1.0kb downstream 5265 true scaffold_4: 26259846-26265110 Theobroma cacao
Thecc1EG020034 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 26259846-26260845 Theobroma cacao
Thecc1EG020034 2.0kb upstream 2.0kb upstream 6265 true scaffold_4: 26260846-26267110 Theobroma cacao
Thecc1EG020034 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 26265111-26267110 Theobroma cacao
Thecc1EG020034 2.0kb downstream 2.0kb downstream 6265 true scaffold_4: 26258846-26265110 Theobroma cacao
Thecc1EG020034 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 26258846-26260845 Theobroma cacao
Thecc1EG020034 5.0kb upstream 5.0kb upstream 9265 true scaffold_4: 26260846-26270110 Theobroma cacao
Thecc1EG020034 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 26265111-26270110 Theobroma cacao
Thecc1EG020034 5.0kb downstream 5.0kb downstream 9265 true scaffold_4: 26255846-26265110 Theobroma cacao
Thecc1EG020034 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 26255846-26260845 Theobroma cacao
Thecc1EG020034 10.0kb upstream 10.0kb upstream 14265 true scaffold_4: 26260846-26275110 Theobroma cacao
Thecc1EG020034 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 26265111-26275110 Theobroma cacao
Thecc1EG020034 10.0kb downstream 10.0kb downstream 14265 true scaffold_4: 26250846-26265110 Theobroma cacao
Thecc1EG020034 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 26250846-26260845 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826118 5264 Brassicales-Malvales View MSA
124320907 5266 SBM View MSA
124168822 5268 Malvidae View MSA
124073484 5270 Rosid View MSA
123753434 5271 Pentapetalae View MSA
122797932 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain