Gene : Thecc1EG020289 T. cacao v1.1
Defline:  (1 of 1) PTHR22957//PTHR22957:SF329 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2053
Name:  ? Thecc1EG020289 Secondary Identifier:  ? PAC:27454185
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020289 0.5kb upstream 0.5kb upstream 6145 true scaffold_4: 27697306-27703450 Theobroma cacao
Thecc1EG020289 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 27702951-27703450 Theobroma cacao
Thecc1EG020289 0.5kb downstream 0.5kb downstream 6145 true scaffold_4: 27696806-27702950 Theobroma cacao
Thecc1EG020289 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 27696806-27697305 Theobroma cacao
Thecc1EG020289 1.0kb upstream 1.0kb upstream 6645 true scaffold_4: 27697306-27703950 Theobroma cacao
Thecc1EG020289 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 27702951-27703950 Theobroma cacao
Thecc1EG020289 1.0kb downstream 1.0kb downstream 6645 true scaffold_4: 27696306-27702950 Theobroma cacao
Thecc1EG020289 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 27696306-27697305 Theobroma cacao
Thecc1EG020289 2.0kb upstream 2.0kb upstream 7645 true scaffold_4: 27697306-27704950 Theobroma cacao
Thecc1EG020289 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 27702951-27704950 Theobroma cacao
Thecc1EG020289 2.0kb downstream 2.0kb downstream 7645 true scaffold_4: 27695306-27702950 Theobroma cacao
Thecc1EG020289 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 27695306-27697305 Theobroma cacao
Thecc1EG020289 5.0kb upstream 5.0kb upstream 10645 true scaffold_4: 27697306-27707950 Theobroma cacao
Thecc1EG020289 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 27702951-27707950 Theobroma cacao
Thecc1EG020289 5.0kb downstream 5.0kb downstream 10645 true scaffold_4: 27692306-27702950 Theobroma cacao
Thecc1EG020289 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 27692306-27697305 Theobroma cacao
Thecc1EG020289 10.0kb upstream 10.0kb upstream 15645 true scaffold_4: 27697306-27712950 Theobroma cacao
Thecc1EG020289 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 27702951-27712950 Theobroma cacao
Thecc1EG020289 10.0kb downstream 10.0kb downstream 15645 true scaffold_4: 27687306-27702950 Theobroma cacao
Thecc1EG020289 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 27687306-27697305 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841303 5264 Brassicales-Malvales View MSA
124336454 5266 SBM View MSA
124246260 5268 Malvidae View MSA
124070393 5270 Rosid View MSA
123742752 5271 Pentapetalae View MSA
122794560 5272 Eudicot View MSA
122050353 5273 Angiosperm View MSA
121347647 5274 Embryophyte View MSA
123426413 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain