Gene : Thecc1EG020273 T. cacao v1.1
Defline:  (1 of 1) PTHR12526//PTHR12526:SF351 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  2038
Name:  ? Thecc1EG020273 Secondary Identifier:  ? PAC:27454294
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7238 Theobroma cacao pathologic  
Tcacao SUCSYN-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020273 0.5kb upstream 0.5kb upstream 8818 true scaffold_4: 27606748-27615565 Theobroma cacao
Thecc1EG020273 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 27606748-27607247 Theobroma cacao
Thecc1EG020273 0.5kb downstream 0.5kb downstream 8818 true scaffold_4: 27607248-27616065 Theobroma cacao
Thecc1EG020273 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 27615566-27616065 Theobroma cacao
Thecc1EG020273 1.0kb upstream 1.0kb upstream 9318 true scaffold_4: 27606248-27615565 Theobroma cacao
Thecc1EG020273 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 27606248-27607247 Theobroma cacao
Thecc1EG020273 1.0kb downstream 1.0kb downstream 9318 true scaffold_4: 27607248-27616565 Theobroma cacao
Thecc1EG020273 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 27615566-27616565 Theobroma cacao
Thecc1EG020273 2.0kb upstream 2.0kb upstream 10318 true scaffold_4: 27605248-27615565 Theobroma cacao
Thecc1EG020273 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 27605248-27607247 Theobroma cacao
Thecc1EG020273 2.0kb downstream 2.0kb downstream 10318 true scaffold_4: 27607248-27617565 Theobroma cacao
Thecc1EG020273 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 27615566-27617565 Theobroma cacao
Thecc1EG020273 5.0kb upstream 5.0kb upstream 13318 true scaffold_4: 27602248-27615565 Theobroma cacao
Thecc1EG020273 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 27602248-27607247 Theobroma cacao
Thecc1EG020273 5.0kb downstream 5.0kb downstream 13318 true scaffold_4: 27607248-27620565 Theobroma cacao
Thecc1EG020273 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 27615566-27620565 Theobroma cacao
Thecc1EG020273 10.0kb upstream 10.0kb upstream 18318 true scaffold_4: 27597248-27615565 Theobroma cacao
Thecc1EG020273 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 27597248-27607247 Theobroma cacao
Thecc1EG020273 10.0kb downstream 10.0kb downstream 18318 true scaffold_4: 27607248-27625565 Theobroma cacao
Thecc1EG020273 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 27615566-27625565 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832824 5264 Brassicales-Malvales View MSA
124340203 5266 SBM View MSA
124237932 5268 Malvidae View MSA
124060783 5270 Rosid View MSA
123737048 5271 Pentapetalae View MSA
122785600 5272 Eudicot View MSA
122049216 5273 Angiosperm View MSA
121347172 5274 Embryophyte View MSA
123427859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain