Gene : Thecc1EG020236 T. cacao v1.1
Defline:  (1 of 13) KOG0114 - Predicted RNA-binding protein (RRM superfamily) Genomic Order:  2006
Name:  ? Thecc1EG020236 Secondary Identifier:  ? PAC:27455356
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020236 0.5kb upstream 0.5kb upstream 2751 true scaffold_4: 27425697-27428447 Theobroma cacao
Thecc1EG020236 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 27427948-27428447 Theobroma cacao
Thecc1EG020236 0.5kb downstream 0.5kb downstream 2751 true scaffold_4: 27425197-27427947 Theobroma cacao
Thecc1EG020236 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 27425197-27425696 Theobroma cacao
Thecc1EG020236 1.0kb upstream 1.0kb upstream 3251 true scaffold_4: 27425697-27428947 Theobroma cacao
Thecc1EG020236 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 27427948-27428947 Theobroma cacao
Thecc1EG020236 1.0kb downstream 1.0kb downstream 3251 true scaffold_4: 27424697-27427947 Theobroma cacao
Thecc1EG020236 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 27424697-27425696 Theobroma cacao
Thecc1EG020236 2.0kb upstream 2.0kb upstream 4251 true scaffold_4: 27425697-27429947 Theobroma cacao
Thecc1EG020236 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 27427948-27429947 Theobroma cacao
Thecc1EG020236 2.0kb downstream 2.0kb downstream 4251 true scaffold_4: 27423697-27427947 Theobroma cacao
Thecc1EG020236 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 27423697-27425696 Theobroma cacao
Thecc1EG020236 5.0kb upstream 5.0kb upstream 7251 true scaffold_4: 27425697-27432947 Theobroma cacao
Thecc1EG020236 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 27427948-27432947 Theobroma cacao
Thecc1EG020236 5.0kb downstream 5.0kb downstream 7251 true scaffold_4: 27420697-27427947 Theobroma cacao
Thecc1EG020236 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 27420697-27425696 Theobroma cacao
Thecc1EG020236 10.0kb upstream 10.0kb upstream 12251 true scaffold_4: 27425697-27437947 Theobroma cacao
Thecc1EG020236 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 27427948-27437947 Theobroma cacao
Thecc1EG020236 10.0kb downstream 10.0kb downstream 12251 true scaffold_4: 27415697-27427947 Theobroma cacao
Thecc1EG020236 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 27415697-27425696 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836416 5264 Brassicales-Malvales View MSA
124344427 5266 SBM View MSA
124249680 5268 Malvidae View MSA
124061793 5270 Rosid View MSA
123747878 5271 Pentapetalae View MSA
122791665 5272 Eudicot View MSA
122044174 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121348177 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain