Gene : Thecc1EG020589 T. cacao v1.1
Defline:  (1 of 1) PTHR11771//PTHR11771:SF53 - LIPOXYGENASE // LINOLEATE 9S-LIPOXYGENASE 5, CHLOROPLASTIC Genomic Order:  2317
Name:  ? Thecc1EG020589 Secondary Identifier:  ? PAC:27454632
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020589 0.5kb upstream 0.5kb upstream 5814 true scaffold_4: 29294722-29300535 Theobroma cacao
Thecc1EG020589 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 29294722-29295221 Theobroma cacao
Thecc1EG020589 0.5kb downstream 0.5kb downstream 5814 true scaffold_4: 29295222-29301035 Theobroma cacao
Thecc1EG020589 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 29300536-29301035 Theobroma cacao
Thecc1EG020589 1.0kb upstream 1.0kb upstream 6314 true scaffold_4: 29294222-29300535 Theobroma cacao
Thecc1EG020589 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 29294222-29295221 Theobroma cacao
Thecc1EG020589 1.0kb downstream 1.0kb downstream 6314 true scaffold_4: 29295222-29301535 Theobroma cacao
Thecc1EG020589 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 29300536-29301535 Theobroma cacao
Thecc1EG020589 2.0kb upstream 2.0kb upstream 7314 true scaffold_4: 29293222-29300535 Theobroma cacao
Thecc1EG020589 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 29293222-29295221 Theobroma cacao
Thecc1EG020589 2.0kb downstream 2.0kb downstream 7314 true scaffold_4: 29295222-29302535 Theobroma cacao
Thecc1EG020589 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 29300536-29302535 Theobroma cacao
Thecc1EG020589 5.0kb upstream 5.0kb upstream 10314 true scaffold_4: 29290222-29300535 Theobroma cacao
Thecc1EG020589 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 29290222-29295221 Theobroma cacao
Thecc1EG020589 5.0kb downstream 5.0kb downstream 10314 true scaffold_4: 29295222-29305535 Theobroma cacao
Thecc1EG020589 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 29300536-29305535 Theobroma cacao
Thecc1EG020589 10.0kb upstream 10.0kb upstream 15314 true scaffold_4: 29285222-29300535 Theobroma cacao
Thecc1EG020589 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 29285222-29295221 Theobroma cacao
Thecc1EG020589 10.0kb downstream 10.0kb downstream 15314 true scaffold_4: 29295222-29310535 Theobroma cacao
Thecc1EG020589 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 29300536-29310535 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122793975 5272 Eudicot View MSA
123837943 5264 Brassicales-Malvales View MSA
124344316 5266 SBM View MSA
124245222 5268 Malvidae View MSA
124071703 5270 Rosid View MSA
123743828 5271 Pentapetalae View MSA
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain