Gene : Thecc1EG020503 T. cacao v1.1
Defline:  (1 of 2) PTHR11088:SF30 - ADENYLATE ISOPENTENYLTRANSFERASE 3, CHLOROPLASTIC Genomic Order:  2243
Name:  ? Thecc1EG020503 Secondary Identifier:  ? PAC:27452330
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-2681 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020503 0.5kb upstream 0.5kb upstream 2216 true scaffold_4: 28875228-28877443 Theobroma cacao
Thecc1EG020503 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 28876944-28877443 Theobroma cacao
Thecc1EG020503 0.5kb downstream 0.5kb downstream 2216 true scaffold_4: 28874728-28876943 Theobroma cacao
Thecc1EG020503 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 28874728-28875227 Theobroma cacao
Thecc1EG020503 1.0kb upstream 1.0kb upstream 2716 true scaffold_4: 28875228-28877943 Theobroma cacao
Thecc1EG020503 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 28876944-28877943 Theobroma cacao
Thecc1EG020503 1.0kb downstream 1.0kb downstream 2716 true scaffold_4: 28874228-28876943 Theobroma cacao
Thecc1EG020503 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 28874228-28875227 Theobroma cacao
Thecc1EG020503 2.0kb upstream 2.0kb upstream 3716 true scaffold_4: 28875228-28878943 Theobroma cacao
Thecc1EG020503 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 28876944-28878943 Theobroma cacao
Thecc1EG020503 2.0kb downstream 2.0kb downstream 3716 true scaffold_4: 28873228-28876943 Theobroma cacao
Thecc1EG020503 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 28873228-28875227 Theobroma cacao
Thecc1EG020503 5.0kb upstream 5.0kb upstream 6716 true scaffold_4: 28875228-28881943 Theobroma cacao
Thecc1EG020503 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 28876944-28881943 Theobroma cacao
Thecc1EG020503 5.0kb downstream 5.0kb downstream 6716 true scaffold_4: 28870228-28876943 Theobroma cacao
Thecc1EG020503 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 28870228-28875227 Theobroma cacao
Thecc1EG020503 10.0kb upstream 10.0kb upstream 11716 true scaffold_4: 28875228-28886943 Theobroma cacao
Thecc1EG020503 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 28876944-28886943 Theobroma cacao
Thecc1EG020503 10.0kb downstream 10.0kb downstream 11716 true scaffold_4: 28865228-28876943 Theobroma cacao
Thecc1EG020503 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 28865228-28875227 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829892 5264 Brassicales-Malvales View MSA
124338029 5266 SBM View MSA
124243543 5268 Malvidae View MSA
124067788 5270 Rosid View MSA
123742235 5271 Pentapetalae View MSA
122793817 5272 Eudicot View MSA
122042275 5273 Angiosperm View MSA
121309945 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain