Gene : Thecc1EG020695 T. cacao v1.1
Defline:  (1 of 1) PTHR15561//PTHR15561:SF0 - CALCITONIN GENE-RELATED PEPTIDE-RECEPTOR COMPONENT PROTEIN // DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC9 Genomic Order:  2408
Name:  ? Thecc1EG020695 Secondary Identifier:  ? PAC:27452286
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020695 0.5kb upstream 0.5kb upstream 2781 true scaffold_4: 29781664-29784444 Theobroma cacao
Thecc1EG020695 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 29781664-29782163 Theobroma cacao
Thecc1EG020695 0.5kb downstream 0.5kb downstream 2781 true scaffold_4: 29782164-29784944 Theobroma cacao
Thecc1EG020695 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 29784445-29784944 Theobroma cacao
Thecc1EG020695 1.0kb upstream 1.0kb upstream 3281 true scaffold_4: 29781164-29784444 Theobroma cacao
Thecc1EG020695 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 29781164-29782163 Theobroma cacao
Thecc1EG020695 1.0kb downstream 1.0kb downstream 3281 true scaffold_4: 29782164-29785444 Theobroma cacao
Thecc1EG020695 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 29784445-29785444 Theobroma cacao
Thecc1EG020695 2.0kb upstream 2.0kb upstream 4281 true scaffold_4: 29780164-29784444 Theobroma cacao
Thecc1EG020695 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 29780164-29782163 Theobroma cacao
Thecc1EG020695 2.0kb downstream 2.0kb downstream 4281 true scaffold_4: 29782164-29786444 Theobroma cacao
Thecc1EG020695 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 29784445-29786444 Theobroma cacao
Thecc1EG020695 5.0kb upstream 5.0kb upstream 7281 true scaffold_4: 29777164-29784444 Theobroma cacao
Thecc1EG020695 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 29777164-29782163 Theobroma cacao
Thecc1EG020695 5.0kb downstream 5.0kb downstream 7281 true scaffold_4: 29782164-29789444 Theobroma cacao
Thecc1EG020695 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 29784445-29789444 Theobroma cacao
Thecc1EG020695 10.0kb upstream 10.0kb upstream 12281 true scaffold_4: 29772164-29784444 Theobroma cacao
Thecc1EG020695 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 29772164-29782163 Theobroma cacao
Thecc1EG020695 10.0kb downstream 10.0kb downstream 12281 true scaffold_4: 29782164-29794444 Theobroma cacao
Thecc1EG020695 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 29784445-29794444 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123818999 5264 Brassicales-Malvales Singleton cluster - no MSA
124315282 5266 SBM Singleton cluster - no MSA
124164211 5268 Malvidae Singleton cluster - no MSA
123887989 5270 Rosid Singleton cluster - no MSA
123470441 5271 Pentapetalae Singleton cluster - no MSA
122505734 5272 Eudicot Singleton cluster - no MSA
122047210 5273 Angiosperm View MSA
121347420 5274 Embryophyte View MSA
123427400 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain