Gene : Thecc1EG020623 T. cacao v1.1
Defline:  (1 of 1) 4.2.1.19 - Imidazoleglycerol-phosphate dehydratase Genomic Order:  2345
Name:  ? Thecc1EG020623 Secondary Identifier:  ? PAC:27452971
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao HISTSYN-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020623 0.5kb upstream 0.5kb upstream 3360 true scaffold_4: 29479633-29482992 Theobroma cacao
Thecc1EG020623 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 29479633-29480132 Theobroma cacao
Thecc1EG020623 0.5kb downstream 0.5kb downstream 3360 true scaffold_4: 29480133-29483492 Theobroma cacao
Thecc1EG020623 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 29482993-29483492 Theobroma cacao
Thecc1EG020623 1.0kb upstream 1.0kb upstream 3860 true scaffold_4: 29479133-29482992 Theobroma cacao
Thecc1EG020623 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 29479133-29480132 Theobroma cacao
Thecc1EG020623 1.0kb downstream 1.0kb downstream 3860 true scaffold_4: 29480133-29483992 Theobroma cacao
Thecc1EG020623 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 29482993-29483992 Theobroma cacao
Thecc1EG020623 2.0kb upstream 2.0kb upstream 4860 true scaffold_4: 29478133-29482992 Theobroma cacao
Thecc1EG020623 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 29478133-29480132 Theobroma cacao
Thecc1EG020623 2.0kb downstream 2.0kb downstream 4860 true scaffold_4: 29480133-29484992 Theobroma cacao
Thecc1EG020623 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 29482993-29484992 Theobroma cacao
Thecc1EG020623 5.0kb upstream 5.0kb upstream 7860 true scaffold_4: 29475133-29482992 Theobroma cacao
Thecc1EG020623 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 29475133-29480132 Theobroma cacao
Thecc1EG020623 5.0kb downstream 5.0kb downstream 7860 true scaffold_4: 29480133-29487992 Theobroma cacao
Thecc1EG020623 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 29482993-29487992 Theobroma cacao
Thecc1EG020623 10.0kb upstream 10.0kb upstream 12860 true scaffold_4: 29470133-29482992 Theobroma cacao
Thecc1EG020623 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 29470133-29480132 Theobroma cacao
Thecc1EG020623 10.0kb downstream 10.0kb downstream 12860 true scaffold_4: 29480133-29492992 Theobroma cacao
Thecc1EG020623 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 29482993-29492992 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833237 5264 Brassicales-Malvales View MSA
124344750 5266 SBM View MSA
124241761 5268 Malvidae View MSA
124067658 5270 Rosid View MSA
123737408 5271 Pentapetalae View MSA
122786767 5272 Eudicot View MSA
122045110 5273 Angiosperm View MSA
121344413 5274 Embryophyte View MSA
123423926 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain