Gene : Thecc1EG020960 T. cacao v1.1
Defline:  (1 of 3) K00574 - cyclopropane-fatty-acyl-phospholipid synthase (E2.1.1.79, cfa) Genomic Order:  2636
Name:  ? Thecc1EG020960 Secondary Identifier:  ? PAC:27452647
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-4942 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020960 0.5kb upstream 0.5kb upstream 4957 true scaffold_4: 31070958-31075914 Theobroma cacao
Thecc1EG020960 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 31070958-31071457 Theobroma cacao
Thecc1EG020960 0.5kb downstream 0.5kb downstream 4957 true scaffold_4: 31071458-31076414 Theobroma cacao
Thecc1EG020960 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 31075915-31076414 Theobroma cacao
Thecc1EG020960 1.0kb upstream 1.0kb upstream 5457 true scaffold_4: 31070458-31075914 Theobroma cacao
Thecc1EG020960 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 31070458-31071457 Theobroma cacao
Thecc1EG020960 1.0kb downstream 1.0kb downstream 5457 true scaffold_4: 31071458-31076914 Theobroma cacao
Thecc1EG020960 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 31075915-31076914 Theobroma cacao
Thecc1EG020960 2.0kb upstream 2.0kb upstream 6457 true scaffold_4: 31069458-31075914 Theobroma cacao
Thecc1EG020960 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 31069458-31071457 Theobroma cacao
Thecc1EG020960 2.0kb downstream 2.0kb downstream 6457 true scaffold_4: 31071458-31077914 Theobroma cacao
Thecc1EG020960 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 31075915-31077914 Theobroma cacao
Thecc1EG020960 5.0kb upstream 5.0kb upstream 9457 true scaffold_4: 31066458-31075914 Theobroma cacao
Thecc1EG020960 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 31066458-31071457 Theobroma cacao
Thecc1EG020960 5.0kb downstream 5.0kb downstream 9457 true scaffold_4: 31071458-31080914 Theobroma cacao
Thecc1EG020960 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 31075915-31080914 Theobroma cacao
Thecc1EG020960 10.0kb upstream 10.0kb upstream 14457 true scaffold_4: 31061458-31075914 Theobroma cacao
Thecc1EG020960 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 31061458-31071457 Theobroma cacao
Thecc1EG020960 10.0kb downstream 10.0kb downstream 14457 true scaffold_4: 31071458-31085914 Theobroma cacao
Thecc1EG020960 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 31075915-31085914 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836708 5264 Brassicales-Malvales View MSA
124347136 5266 SBM View MSA
124247291 5268 Malvidae View MSA
124064151 5270 Rosid View MSA
123753526 5271 Pentapetalae View MSA
122793663 5272 Eudicot View MSA
122044798 5273 Angiosperm View MSA
121344638 5274 Embryophyte View MSA
123426651 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain