Gene : Thecc1EG020956 T. cacao v1.1
Defline:  (1 of 1) PTHR10108//PTHR10108:SF916 - METHYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  2633
Name:  ? Thecc1EG020956 Secondary Identifier:  ? PAC:27452950
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-4942 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020956 0.5kb upstream 0.5kb upstream 11034 true scaffold_4: 31037542-31048575 Theobroma cacao
Thecc1EG020956 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 31037542-31038041 Theobroma cacao
Thecc1EG020956 0.5kb downstream 0.5kb downstream 11034 true scaffold_4: 31038042-31049075 Theobroma cacao
Thecc1EG020956 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 31048576-31049075 Theobroma cacao
Thecc1EG020956 1.0kb upstream 1.0kb upstream 11534 true scaffold_4: 31037042-31048575 Theobroma cacao
Thecc1EG020956 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 31037042-31038041 Theobroma cacao
Thecc1EG020956 1.0kb downstream 1.0kb downstream 11534 true scaffold_4: 31038042-31049575 Theobroma cacao
Thecc1EG020956 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 31048576-31049575 Theobroma cacao
Thecc1EG020956 2.0kb upstream 2.0kb upstream 12534 true scaffold_4: 31036042-31048575 Theobroma cacao
Thecc1EG020956 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 31036042-31038041 Theobroma cacao
Thecc1EG020956 2.0kb downstream 2.0kb downstream 12534 true scaffold_4: 31038042-31050575 Theobroma cacao
Thecc1EG020956 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 31048576-31050575 Theobroma cacao
Thecc1EG020956 5.0kb upstream 5.0kb upstream 15534 true scaffold_4: 31033042-31048575 Theobroma cacao
Thecc1EG020956 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 31033042-31038041 Theobroma cacao
Thecc1EG020956 5.0kb downstream 5.0kb downstream 15534 true scaffold_4: 31038042-31053575 Theobroma cacao
Thecc1EG020956 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 31048576-31053575 Theobroma cacao
Thecc1EG020956 10.0kb upstream 10.0kb upstream 20534 true scaffold_4: 31028042-31048575 Theobroma cacao
Thecc1EG020956 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 31028042-31038041 Theobroma cacao
Thecc1EG020956 10.0kb downstream 10.0kb downstream 20534 true scaffold_4: 31038042-31058575 Theobroma cacao
Thecc1EG020956 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 31048576-31058575 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841864 5264 Brassicales-Malvales View MSA
124323081 5266 SBM View MSA
124251387 5268 Malvidae View MSA
124060864 5270 Rosid View MSA
123737400 5271 Pentapetalae View MSA
122792723 5272 Eudicot View MSA
122047395 5273 Angiosperm View MSA
121346129 5274 Embryophyte View MSA
123428105 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain