Gene : Thecc1EG020885 T. cacao v1.1
Defline:  (1 of 1) K12119 - cryptochrome 2 (CRY2) Genomic Order:  2572
Name:  ? Thecc1EG020885 Secondary Identifier:  ? PAC:27454791
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020885 0.5kb upstream 0.5kb upstream 7456 true scaffold_4: 30720699-30728154 Theobroma cacao
Thecc1EG020885 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 30727655-30728154 Theobroma cacao
Thecc1EG020885 0.5kb downstream 0.5kb downstream 7456 true scaffold_4: 30720199-30727654 Theobroma cacao
Thecc1EG020885 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 30720199-30720698 Theobroma cacao
Thecc1EG020885 1.0kb upstream 1.0kb upstream 7956 true scaffold_4: 30720699-30728654 Theobroma cacao
Thecc1EG020885 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 30727655-30728654 Theobroma cacao
Thecc1EG020885 1.0kb downstream 1.0kb downstream 7956 true scaffold_4: 30719699-30727654 Theobroma cacao
Thecc1EG020885 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 30719699-30720698 Theobroma cacao
Thecc1EG020885 2.0kb upstream 2.0kb upstream 8956 true scaffold_4: 30720699-30729654 Theobroma cacao
Thecc1EG020885 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 30727655-30729654 Theobroma cacao
Thecc1EG020885 2.0kb downstream 2.0kb downstream 8956 true scaffold_4: 30718699-30727654 Theobroma cacao
Thecc1EG020885 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 30718699-30720698 Theobroma cacao
Thecc1EG020885 5.0kb upstream 5.0kb upstream 11956 true scaffold_4: 30720699-30732654 Theobroma cacao
Thecc1EG020885 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 30727655-30732654 Theobroma cacao
Thecc1EG020885 5.0kb downstream 5.0kb downstream 11956 true scaffold_4: 30715699-30727654 Theobroma cacao
Thecc1EG020885 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 30715699-30720698 Theobroma cacao
Thecc1EG020885 10.0kb upstream 10.0kb upstream 16956 true scaffold_4: 30720699-30737654 Theobroma cacao
Thecc1EG020885 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 30727655-30737654 Theobroma cacao
Thecc1EG020885 10.0kb downstream 10.0kb downstream 16956 true scaffold_4: 30710699-30727654 Theobroma cacao
Thecc1EG020885 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 30710699-30720698 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833733 5264 Brassicales-Malvales View MSA
124344435 5266 SBM View MSA
124251341 5268 Malvidae View MSA
124066295 5270 Rosid View MSA
123738147 5271 Pentapetalae View MSA
122792892 5272 Eudicot View MSA
122048329 5273 Angiosperm View MSA
121343845 5274 Embryophyte View MSA
123428792 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain