Gene : Thecc1EG020892 T. cacao v1.1
Defline:  (1 of 26) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  2578
Name:  ? Thecc1EG020892 Secondary Identifier:  ? PAC:27454338
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020892 0.5kb upstream 0.5kb upstream 3575 true scaffold_4: 30759670-30763244 Theobroma cacao
Thecc1EG020892 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 30762745-30763244 Theobroma cacao
Thecc1EG020892 0.5kb downstream 0.5kb downstream 3575 true scaffold_4: 30759170-30762744 Theobroma cacao
Thecc1EG020892 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 30759170-30759669 Theobroma cacao
Thecc1EG020892 1.0kb upstream 1.0kb upstream 4075 true scaffold_4: 30759670-30763744 Theobroma cacao
Thecc1EG020892 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 30762745-30763744 Theobroma cacao
Thecc1EG020892 1.0kb downstream 1.0kb downstream 4075 true scaffold_4: 30758670-30762744 Theobroma cacao
Thecc1EG020892 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 30758670-30759669 Theobroma cacao
Thecc1EG020892 2.0kb upstream 2.0kb upstream 5075 true scaffold_4: 30759670-30764744 Theobroma cacao
Thecc1EG020892 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 30762745-30764744 Theobroma cacao
Thecc1EG020892 2.0kb downstream 2.0kb downstream 5075 true scaffold_4: 30757670-30762744 Theobroma cacao
Thecc1EG020892 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 30757670-30759669 Theobroma cacao
Thecc1EG020892 5.0kb upstream 5.0kb upstream 8075 true scaffold_4: 30759670-30767744 Theobroma cacao
Thecc1EG020892 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 30762745-30767744 Theobroma cacao
Thecc1EG020892 5.0kb downstream 5.0kb downstream 8075 true scaffold_4: 30754670-30762744 Theobroma cacao
Thecc1EG020892 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 30754670-30759669 Theobroma cacao
Thecc1EG020892 10.0kb upstream 10.0kb upstream 13075 true scaffold_4: 30759670-30772744 Theobroma cacao
Thecc1EG020892 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 30762745-30772744 Theobroma cacao
Thecc1EG020892 10.0kb downstream 10.0kb downstream 13075 true scaffold_4: 30749670-30762744 Theobroma cacao
Thecc1EG020892 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 30749670-30759669 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834668 5264 Brassicales-Malvales View MSA
124346405 5266 SBM View MSA
124250331 5268 Malvidae View MSA
124069006 5270 Rosid View MSA
123747839 5271 Pentapetalae View MSA
122792637 5272 Eudicot View MSA
122050449 5273 Angiosperm View MSA
121311915 5274 Embryophyte View MSA
123349144 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain