Gene : Thecc1EG020840 T. cacao v1.1
Defline:  (1 of 2) PF05514 - HR-like lesion-inducing (HR_lesion) Genomic Order:  2535
Name:  ? Thecc1EG020840 Secondary Identifier:  ? PAC:27452298
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020840 0.5kb upstream 0.5kb upstream 3098 true scaffold_4: 30520151-30523248 Theobroma cacao
Thecc1EG020840 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 30520151-30520650 Theobroma cacao
Thecc1EG020840 0.5kb downstream 0.5kb downstream 3098 true scaffold_4: 30520651-30523748 Theobroma cacao
Thecc1EG020840 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 30523249-30523748 Theobroma cacao
Thecc1EG020840 1.0kb upstream 1.0kb upstream 3598 true scaffold_4: 30519651-30523248 Theobroma cacao
Thecc1EG020840 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 30519651-30520650 Theobroma cacao
Thecc1EG020840 1.0kb downstream 1.0kb downstream 3598 true scaffold_4: 30520651-30524248 Theobroma cacao
Thecc1EG020840 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 30523249-30524248 Theobroma cacao
Thecc1EG020840 2.0kb upstream 2.0kb upstream 4598 true scaffold_4: 30518651-30523248 Theobroma cacao
Thecc1EG020840 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 30518651-30520650 Theobroma cacao
Thecc1EG020840 2.0kb downstream 2.0kb downstream 4598 true scaffold_4: 30520651-30525248 Theobroma cacao
Thecc1EG020840 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 30523249-30525248 Theobroma cacao
Thecc1EG020840 5.0kb upstream 5.0kb upstream 7598 true scaffold_4: 30515651-30523248 Theobroma cacao
Thecc1EG020840 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 30515651-30520650 Theobroma cacao
Thecc1EG020840 5.0kb downstream 5.0kb downstream 7598 true scaffold_4: 30520651-30528248 Theobroma cacao
Thecc1EG020840 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 30523249-30528248 Theobroma cacao
Thecc1EG020840 10.0kb upstream 10.0kb upstream 12598 true scaffold_4: 30510651-30523248 Theobroma cacao
Thecc1EG020840 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 30510651-30520650 Theobroma cacao
Thecc1EG020840 10.0kb downstream 10.0kb downstream 12598 true scaffold_4: 30520651-30533248 Theobroma cacao
Thecc1EG020840 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 30523249-30533248 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827617 5264 Brassicales-Malvales View MSA
124345754 5266 SBM View MSA
124249852 5268 Malvidae View MSA
124068241 5270 Rosid View MSA
123750516 5271 Pentapetalae View MSA
122797406 5272 Eudicot View MSA
122050658 5273 Angiosperm View MSA
121351347 5274 Embryophyte View MSA
123426506 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain