Gene : Thecc1EG021240 T. cacao v1.1

Defline:  (1 of 12) 3.6.4.2 - Dynein ATPase Genomic Order:  2890
Name:  ? Thecc1EG021240 Secondary Identifier:  ? PAC:27452295

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021240 0.5kb upstream 0.5kb upstream 5174 true scaffold_4: 32280994-32286167 Theobroma cacao
Thecc1EG021240 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 32280994-32281493 Theobroma cacao
Thecc1EG021240 0.5kb downstream 0.5kb downstream 5174 true scaffold_4: 32281494-32286667 Theobroma cacao
Thecc1EG021240 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 32286168-32286667 Theobroma cacao
Thecc1EG021240 1.0kb upstream 1.0kb upstream 5674 true scaffold_4: 32280494-32286167 Theobroma cacao
Thecc1EG021240 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 32280494-32281493 Theobroma cacao
Thecc1EG021240 1.0kb downstream 1.0kb downstream 5674 true scaffold_4: 32281494-32287167 Theobroma cacao
Thecc1EG021240 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 32286168-32287167 Theobroma cacao
Thecc1EG021240 2.0kb upstream 2.0kb upstream 6674 true scaffold_4: 32279494-32286167 Theobroma cacao
Thecc1EG021240 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 32279494-32281493 Theobroma cacao
Thecc1EG021240 2.0kb downstream 2.0kb downstream 6674 true scaffold_4: 32281494-32288167 Theobroma cacao
Thecc1EG021240 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 32286168-32288167 Theobroma cacao
Thecc1EG021240 5.0kb upstream 5.0kb upstream 9674 true scaffold_4: 32276494-32286167 Theobroma cacao
Thecc1EG021240 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 32276494-32281493 Theobroma cacao
Thecc1EG021240 5.0kb downstream 5.0kb downstream 9674 true scaffold_4: 32281494-32291167 Theobroma cacao
Thecc1EG021240 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 32286168-32291167 Theobroma cacao
Thecc1EG021240 10.0kb upstream 10.0kb upstream 14674 true scaffold_4: 32271494-32286167 Theobroma cacao
Thecc1EG021240 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 32271494-32281493 Theobroma cacao
Thecc1EG021240 10.0kb downstream 10.0kb downstream 14674 true scaffold_4: 32281494-32296167 Theobroma cacao
Thecc1EG021240 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 32286168-32296167 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123819000 5264 Brassicales-Malvales Singleton cluster - no MSA
124315283 5266 SBM Singleton cluster - no MSA
124164212 5268 Malvidae Singleton cluster - no MSA
124069014 5270 Rosid View MSA
123750376 5271 Pentapetalae View MSA
122793748 5272 Eudicot View MSA
122050709 5273 Angiosperm View MSA
121351577 5274 Embryophyte View MSA
123427557 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain