Gene : Thecc1EG021362 T. cacao v1.1
Defline:  (1 of 1) PTHR11246//PTHR11246:SF11 - PRE-MRNA SPLICING FACTOR // SUBFAMILY NOT NAMED Genomic Order:  3004
Name:  ? Thecc1EG021362 Secondary Identifier:  ? PAC:27454657
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021362 0.5kb upstream 0.5kb upstream 5211 true scaffold_4: 32750036-32755246 Theobroma cacao
Thecc1EG021362 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 32754747-32755246 Theobroma cacao
Thecc1EG021362 0.5kb downstream 0.5kb downstream 5211 true scaffold_4: 32749536-32754746 Theobroma cacao
Thecc1EG021362 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 32749536-32750035 Theobroma cacao
Thecc1EG021362 1.0kb upstream 1.0kb upstream 5711 true scaffold_4: 32750036-32755746 Theobroma cacao
Thecc1EG021362 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 32754747-32755746 Theobroma cacao
Thecc1EG021362 1.0kb downstream 1.0kb downstream 5711 true scaffold_4: 32749036-32754746 Theobroma cacao
Thecc1EG021362 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 32749036-32750035 Theobroma cacao
Thecc1EG021362 2.0kb upstream 2.0kb upstream 6711 true scaffold_4: 32750036-32756746 Theobroma cacao
Thecc1EG021362 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 32754747-32756746 Theobroma cacao
Thecc1EG021362 2.0kb downstream 2.0kb downstream 6711 true scaffold_4: 32748036-32754746 Theobroma cacao
Thecc1EG021362 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 32748036-32750035 Theobroma cacao
Thecc1EG021362 5.0kb upstream 5.0kb upstream 9711 true scaffold_4: 32750036-32759746 Theobroma cacao
Thecc1EG021362 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 32754747-32759746 Theobroma cacao
Thecc1EG021362 5.0kb downstream 5.0kb downstream 9711 true scaffold_4: 32745036-32754746 Theobroma cacao
Thecc1EG021362 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 32745036-32750035 Theobroma cacao
Thecc1EG021362 10.0kb upstream 10.0kb upstream 14711 true scaffold_4: 32750036-32764746 Theobroma cacao
Thecc1EG021362 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 32754747-32764746 Theobroma cacao
Thecc1EG021362 10.0kb downstream 10.0kb downstream 14711 true scaffold_4: 32740036-32754746 Theobroma cacao
Thecc1EG021362 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 32740036-32750035 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831565 5264 Brassicales-Malvales View MSA
124342320 5266 SBM View MSA
124239341 5268 Malvidae View MSA
124068395 5270 Rosid View MSA
123738707 5271 Pentapetalae View MSA
122785733 5272 Eudicot View MSA
122045803 5273 Angiosperm View MSA
121347317 5274 Embryophyte View MSA
123426639 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain