Gene : Thecc1EG021462 T. cacao v1.1

Defline:  (1 of 1) PTHR24319:SF26 - PROTEIN DHS-1 Genomic Order:  3098
Name:  ? Thecc1EG021462 Secondary Identifier:  ? PAC:27456128

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021462 0.5kb upstream 0.5kb upstream 3722 true scaffold_4: 33185983-33189704 Theobroma cacao
Thecc1EG021462 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 33189205-33189704 Theobroma cacao
Thecc1EG021462 0.5kb downstream 0.5kb downstream 3722 true scaffold_4: 33185483-33189204 Theobroma cacao
Thecc1EG021462 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 33185483-33185982 Theobroma cacao
Thecc1EG021462 1.0kb upstream 1.0kb upstream 4222 true scaffold_4: 33185983-33190204 Theobroma cacao
Thecc1EG021462 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 33189205-33190204 Theobroma cacao
Thecc1EG021462 1.0kb downstream 1.0kb downstream 4222 true scaffold_4: 33184983-33189204 Theobroma cacao
Thecc1EG021462 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 33184983-33185982 Theobroma cacao
Thecc1EG021462 2.0kb upstream 2.0kb upstream 5222 true scaffold_4: 33185983-33191204 Theobroma cacao
Thecc1EG021462 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 33189205-33191204 Theobroma cacao
Thecc1EG021462 2.0kb downstream 2.0kb downstream 5222 true scaffold_4: 33183983-33189204 Theobroma cacao
Thecc1EG021462 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 33183983-33185982 Theobroma cacao
Thecc1EG021462 5.0kb upstream 5.0kb upstream 8222 true scaffold_4: 33185983-33194204 Theobroma cacao
Thecc1EG021462 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 33189205-33194204 Theobroma cacao
Thecc1EG021462 5.0kb downstream 5.0kb downstream 8222 true scaffold_4: 33180983-33189204 Theobroma cacao
Thecc1EG021462 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 33180983-33185982 Theobroma cacao
Thecc1EG021462 10.0kb upstream 10.0kb upstream 13222 true scaffold_4: 33185983-33199204 Theobroma cacao
Thecc1EG021462 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 33189205-33199204 Theobroma cacao
Thecc1EG021462 10.0kb downstream 10.0kb downstream 13222 true scaffold_4: 33175983-33189204 Theobroma cacao
Thecc1EG021462 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 33175983-33185982 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837628 5264 Brassicales-Malvales View MSA
124336545 5266 SBM View MSA
124252161 5268 Malvidae View MSA
124062137 5270 Rosid View MSA
123740107 5271 Pentapetalae View MSA
122786554 5272 Eudicot View MSA
122045654 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121347612 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain